Polyodon spathula (Mississippi paddlefish): 121297221
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Entry
121297221 CDS
T07273
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04137
Mitophagy - animal
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121297221
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121297221
04137 Mitophagy - animal
121297221
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121297221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121297221
Ubiquitin system [BR:
pspa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121297221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
121297221
NCBI-ProteinID:
XP_041079305
LinkDB
All DBs
Position
22:28650223..28652918
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AA seq
381 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtaaaaacacttactggcaagaccataactcttgaagttgagcccagt
gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcatccccccagaccag
cagaggctgatcttcgctggcaagcagcttgaagatggtcgcacactgtcagactacaac
atccagaaggagtccaccctgcacttggttctgcgtctgaggggaggtatgcagatcttt
gtcaagaccttgactggcaagaccatcactctggaggttgaacccgctgacaccattgag
aacgtcaaggccaagatccaggacaaggaaggcatccccccagaccagcagaggctgatc
tttgctggcaagcagcttgaagatggtcgcaccctctcagactacaacatccagaaggag
tccaccctgcacttggttctgcgtctgaggggaggtatgcagatctttgtcaagaccttg
actggcaagaccatcactctggaggttgaacccgctgacaccattgagaacgtcaaggcc
aagatccaggacaaggaaggcatccccccagaccagcagaggctgatctttgctggcaag
cagcttgaagatggccgtaccctctccgactacaacatccagaaggagtccaccctgcac
ttggtgctgcgtctgaggggaggtatgcagatctttgtgaagaccttgactggcaagacc
atcacgctggaggttgagcctagtgacaccatcgagaacgtcaaggccaagatccaggac
aaggaaggcatccccccagaccagcagaggctgatctttgctggcaagcagcttgaagat
ggccgtaccctctccgactacaacatccagaaggaatccaccctgcacttggtcctgcgt
ctgaggggaggtatgcagatctttgtgaagaccttgactggcaagaccatcacgctggag
gttgagcctagtgacaccatcgagaacgtgaaggccaagatccaggataaggaaggcatc
cccccagaccagcagaggctgatctttgctggcaagcagcttgaagatggtcgcaccctc
tcagactacaacatccagaaggagtccaccctgcacttggttctgcgtctgaggggagga
cagtaa
DBGET
integrated database retrieval system
