Polyodon spathula (Mississippi paddlefish): 121297730
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Entry
121297730 CDS
T07273
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04814
Motor proteins
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121297730
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121297730
04820 Cytoskeleton in muscle cells
121297730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121297730
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
121297730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_FSTL1
EF-hand_9
AIF-1
EH
EF-hand_11
SPARC_Ca_bdg
EF_EFCAB10_C
CDI_toxin_EC869_like
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
121297730
NCBI-ProteinID:
XP_041080121
LinkDB
All DBs
Position
23:25987763..25991823
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AA seq
161 aa
AA seq
DB search
MPTAAQIEALSYLSDEMVAEFKAAFDMFDTDGGGDISTKELGTVMKMLGQNPSREELDAI
IEEVDEDGSGSIDFQEFLVMMVQQLKEDQAGKSEEELSEFFRVFDKNGDGYIDRDEFATI
IRSSGETISDVEIDELMADGDKNMDGKLDFDEFLKMMEGVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgccgcacaaatagaagcgctgtcgtacctgagcgacgagatggtggctgag
ttcaaggctgcctttgacatgtttgacactgatggtggtggagacatcagcaccaaggag
ttgggtaccgtcatgaagatgctgggacagaacccaagccgagaggagctggatgccatc
attgaggaggtagatgaggacggcagcggttccatcgactttcaagagttcttggtcatg
atggtgcaacagcttaaagaggatcaggctggcaagagtgaggaagagttgtctgaattc
ttccgcgtcttcgacaagaacggtgatggctacattgaccgcgatgagtttgcgacaatt
atccgcagcagcggggagaccatctctgacgttgagatcgacgaactcatggccgacgga
gacaagaacatggacggcaagttggactttgacgagtttctcaagatgatggaaggtgtg
cagtaa
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integrated database retrieval system
