Polyodon spathula (Mississippi paddlefish): 121300766
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Entry
121300766 CDS
T07273
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121300766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121300766
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Others
GGA
121300766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DASH_Dad4
HEAT_Maestro
PCRF
Motif
Other DBs
NCBI-GeneID:
121300766
NCBI-ProteinID:
XP_041085533
LinkDB
All DBs
Position
26:complement(15412371..15423451)
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AA seq
637 aa
AA seq
DB search
MRENGLQDMAAGEETLESWLNRATDPSNQEEKWEFIKGFYEQVNKELEGPQIATRLLAHK
IQSPQEKEALQALTILETCMNNCGKRFHSEAGKFRFLNELIKVLSPKYLGTWSTEKVKSR
LEQTLYSWTVWLPEDVKIKEAYHMLKKQGIIKKDPKLPENTLWPPPCPRTGSSVFDEEDK
SKLLARLLKSSHPDDLQAANRLIKNTVKEDQEKMEKVSKRINAIEEVQKNTKLLNEMLTN
YRSRDISDSDRDIMKGLYDKCEKLRPTLFRLAGDTVDNDEALAEILQANDKLTLVVHLYQ
ELVERREVNGNSGSDQSKTKAPQSPGAIKSYHLIDLAELESQSSPSTGSCESPQCRGGNL
PTSLLDEELMSLGLDSPSFPLISGMYNLALDQPVSQSGFSGSKSPEGLRAAVSSSQGSMQ
DHLWLCGRDSSRWPLSPQAQLTKPGYVQSTDTAQSRPLLQPRSALGDLQNHPITSSARHT
KPVSPAQGEPLHGSLSDVFVSLDSIKPGGILPVTAYDKNGFRVMLHFARDPPAGRPDVLV
TVLSMLSTSPLPIRNIVFQAAVPKAMRIKLQTATSSELPAFNPILPPAAISQVMLLTNPQ
KEKVRLRFKLSFTQGGQSFCEAGEVEHFPEIGSWTDH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaaacggtctgcaggacatggcggctggagaagaaactttagaatcttggctc
aacagagccacagaccccagtaaccaggaggagaagtgggaattcatcaaaggattctat
gagcaggttaacaaagaactagaaggcccacagattgctactcgcctcctggctcataaa
atccaatcacctcaagagaaggaggcgctgcaggcactcacaattttggagacctgcatg
aacaactgcgggaaaaggtttcacagtgaagctggaaagttccgatttctgaatgaattg
atcaaagtcttgtcaccaaagtatctgggaacgtggagtacggagaaagtgaaatcaagg
cttgaacaaacactgtacagctggactgtgtggcttccagaagatgttaaaataaaggaa
gcctatcacatgctgaagaagcaaggtattataaaaaaagaccccaagttaccagagaac
acactgtggccacctccttgtccaagaactggaagctcggtgtttgatgaggaagataaa
tccaagcttttagccaggcttttgaaaagtagccatcctgacgacctccaggctgccaac
agactgattaagaatacagtgaaggaggaccaagagaagatggagaaggtgtctaaacga
ataaacgccattgaagaggttcagaagaacacgaagctcctgaatgagatgctgactaat
tacaggagcagggacatctccgacagcgacagagacatcatgaagggcctgtatgacaag
tgtgagaagctgagaccgacccttttccgactggccggagacactgttgataacgacgaa
gcactggcggaaatcctccaagcgaatgacaaactgaccctggtagttcatttatatcaa
gagcttgttgaaagacgagaagtgaatgggaatagtggaagtgaccagtccaagacaaaa
gctccacagagcccaggtgctatcaagagttaccacctcatagacctggcagagctggag
tcgcagtccagtcccagcacggggtcctgcgagagcccccagtgcagaggaggcaatctc
cccacctccttgctggatgaagagctcatgtcgttgggactggatagcccatctttccca
ctgatttcaggaatgtataacttggcgttagatcagcctgtgagccagagtgggttcagt
ggtagtaagagtcctgaagggctgagagccgcagtgagcagcagccagggcagtatgcag
gaccacctgtggctgtgtggaagagactcctcgcgatggcctctgtcaccacaggctcag
ctaaccaagcctgggtacgtgcagagtacggacacagcacagtccaggcctctcctacag
cccaggtcagccctgggtgacctccagaaccatccaatcacaagctcggcacggcacact
aaacctgtcagccccgcccagggagagcccttgcacggctctctgtctgacgtcttcgtt
tcactggactccattaagccaggtggcattcttccagtcacagcctatgataaaaacggc
ttccgagtgatgctgcactttgccagagacccccctgctggccgccctgacgtgctggtg
actgtgctgtccatgctcagcacctcccctctccccatcaggaatattgtattccaggct
gcggtgcccaaggctatgagaatcaagctgcagacagcgaccagctcagaactccctgct
tttaaccctatactgccccctgctgccatctcccaggtcatgctgttaaccaatccacag
aaggagaaggtgcggttaaggttcaagctgagcttcacacaaggcggccagtccttctgc
gaggctggagaggtggagcactttccagaaatcggctcctggaccgatcactga
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