Polyodon spathula (Mississippi paddlefish): 121300937
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Entry
121300937 CDS
T07273
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
pspa04518
Integrin signaling
pspa04540
Gap junction
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121300937
04020 Calcium signaling pathway
121300937
09133 Signaling molecules and interaction
04518 Integrin signaling
121300937
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121300937
04540 Gap junction
121300937
09142 Cell motility
04810 Regulation of actin cytoskeleton
121300937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121300937
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121300937
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121300937
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121300937
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
121300937
NCBI-ProteinID:
XP_041085875
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Position
26:3447430..3468195
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AA seq
222 aa
AA seq
DB search
MRTTTCYLLISSFYLWFAFAEEAEIPQELIEKLSHSEIRSISDLQRLLEIESVGNEVVAE
SKTRYHKDHSSSHVDKHAQILIRRKRSIEEAVPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTNNMKCQPSRIHHRTVKVAKVEYVRRKPKLKEVLVRLEEHSECMCT
SQHYHTELKEAETGDLECCQFTFHAGYSLLKRKSLRTTVLNK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccacaacttgttatttgctgatctcttcgttctacctatggttcgcctttgcc
gaggaagcagagattccccaagaacttattgaaaaactgtctcacagcgaaatccgcagc
ataagcgatctgcagcgcctccttgagattgaatccgtaggaaacgaggttgtagcagaa
tcaaagacgagataccacaaggatcattcttcaagccatgtggacaagcacgcccagata
ttaataagaagaaaacgaagcattgaggaagcagtgcccgcggtgtgcaagacgcggaca
gtcatctacgagatccctcgcagccagatcgacccgacttctgccaactttctgatatgg
ccgccttgtgtggaggtgaagcgctgcactggctgctgcaacacaaataatatgaaatgc
cagccatcgcggatacatcacagaacagtgaaggttgcaaaagtggagtatgtgaggaga
aaacctaaattaaaagaagtactggtgaggttagaagagcactcagaatgcatgtgcacg
tcacagcattaccacacagagctcaaagaagcagaaacaggagatttggaatgctgtcag
tttacattccatgctgggtattctctgctgaaaagaaaatctctcaggacaactgtgtta
aacaagtga
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