Polyodon spathula (Mississippi paddlefish): 121301063
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Entry
121301063 CDS
T07273
Name
(RefSeq) semaphorin-4E-like
KO
K06521
semaphorin 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121301063
CD molecules [BR:
pspa04090
]
Proteins
121301063
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_3
Ig_2
I-set
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
121301063
NCBI-ProteinID:
XP_041086106
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All DBs
Position
26:17078950..17099949
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AA seq
816 aa
AA seq
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MFGSTALAAVLCLLLCGLNRRLEASVLNCIPRKSVLHQNGSIKTFEEEGFFNYSTMLVRE
DVNTLLVGAREAVYALNMDDISERISTVYWPVLESKQQECTNKGKNKDTECRNYIRTLNK
IGDAKMYVCGTNAFSPTCAYMTFNKGQLLLENNSEESKGKCPFDPFQRYASVMVEDDLYA
ATSINFLGSEPVVIRNSGNSLRTEFKDSWLNEPNFIYMDVVQESQNNADGDDDKVYLFFS
ETAVEYDFYNKLLVSRIARVCKGDLGGQRTLQKKWTTFLKASLVCSVLELNVQLIVQDVF
VLKSKDWRDTIFYGVFIPQLGALDISAVCAYTMNTVQDVFSKGKYKAPVTVESSHVKWVM
YSGEVPVPRPGACINNQARAMGINHSLDLPDKTLQFVRDHPLMDDSVTPIGGQPRLVKRG
SLFSRIVVDRVTALDGKPYDVMFIGTENGFLQKAVNFDGEMFIIEEVQLFQPPESVQSLT
LSSKKGQVYAGSSSRVVQMPFSVCRRYDTCLGCVLARDPYCAWDLAVNRCAATAGRTAAP
QNFIQSVGKGDASSCPELGNIKTKKRTFIPGSNIQLKCSPISNLAQIHWTLNGSSIQLRN
PKYYAYDGGILLFNVAVADAGQYTCQSVEQANGKQYQQTMAVYSLEPEQSQGQNTEVAVT
TQSPGITRVTPTPPVVPDVWNPKIMLHADDKKVLFLKIFVGILACLLVCLLTWNLCKGHM
PLPCVKPKMKEASAATPRMVQIGGVDTTAHQVSFNARGTFEASPMVNSQTGTGVNSWITN
NNNAAQQSKDLVDSFMIPSTLLGVDDFRYIDEESEI
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcagtactgcgctggcagctgtgctctgcttgctactgtgtggattgaatcga
aggctcgaagcctccgtgttaaactgcatccccaggaaaagtgtgctccaccaaaatggt
agcattaaaactttcgaagaggagggattcttcaattattcgaccatgctggttagagaa
gacgttaacactctgcttgtgggagccagggaagctgtctatgcccttaacatggatgac
atatctgagagaatatctactgtttactggccagttctggagagcaaacagcaagaatgt
acgaacaaaggaaaaaacaaagatacagaatgtcggaactacattcgtacccttaacaaa
ataggggatgccaaaatgtatgtttgtgggacaaatgcgttcagtcctacctgtgcctat
atgactttcaataaaggacagttgctacttgaaaacaattctgaagagagtaagggcaag
tgtccttttgaccccttccagaggtacgcctcagttatggttgaagatgatctctacgct
gcgacttccatcaatttcttgggctcagaaccagtggtcatacgcaattcaggaaactcc
ctccggaccgaattcaaggactcctggctcaatgaacccaacttcatttacatggacgtg
gtgcaggagagccagaataacgcagatggagacgatgataaagtgtacctgttcttcagc
gaaactgctgtggagtacgacttctacaacaagctcctggtgtccaggattgctcgtgtg
tgcaagggtgatctaggaggccagaggacactgcagaagaaatggacgaccttcttaaaa
gccagcctggtctgttctgtcctggagctgaatgtgcagctcatcgtccaggatgtgttt
gtattgaagtcgaaggactggagagataccatcttctacggcgtgttcatcccgcagttg
ggggcgctggacatctctgcagtgtgtgcgtacaccatgaacacggttcaggatgttttc
tctaagggaaaatacaaagctcctgtcacagtggagtcctctcatgtgaagtgggttatg
tacagcggagaggtgcctgtgcccaggcctggggcatgtattaataaccaagcaagagct
atgggtatcaaccactccctcgacctgcctgacaaaacgctgcagtttgtaagagaccat
cctttgatggatgattcagtgacccccatcggcggtcagcccagactggtgaagaggggg
tccctgttcagcaggatcgtggtggacagagtcacagcgctggatggcaaaccatacgac
gtcatgttcatcggaacagagaatgggttcctgcagaaagctgtgaactttgacggggag
atgttcattattgaagaagtccagctttttcaaccacctgagtcagtccagagtcttact
ctttcttctaaaaagggtcaggtctatgccgggtcctcgtcccgtgtagtgcagatgcct
ttctcagtgtgcagacggtatgacacgtgtctgggttgcgtgctagcaagggatccatac
tgtgcatgggacctggctgtgaatcggtgtgctgctaccgctggtaggactgctgcacca
cagaacttcatccagagtgtaggaaaaggagatgcctctagctgcccagagcttggaaac
atcaaaacaaaaaagcgcacatttattcctgggagtaacattcagctcaaatgcagtccc
atatcaaacctggcgcagatccactggactctgaacgggagctccattcagctgaggaac
cccaagtactacgcctacgacggcgggattcttctgttcaatgtggcagtggcggacgcg
ggacagtacacctgtcagtctgtggagcaagcgaacgggaagcaataccagcagacgatg
gccgtttacagcctagaaccagaacagagccaggggcagaacactgaggttgcagtgacc
acccagtcccccggaatcaccagagtcacgcccacgccgccagtagttccagatgtatgg
aacccgaaaataatgctgcacgcggacgacaaaaaggtgctgtttttgaaaatttttgtc
ggcattttagcatgccttctggtttgtttgctgacttggaacttgtgcaagggacacatg
ccgctgccttgcgtgaagccgaagatgaaggaggcgtctgccgctacgccgaggatggtg
cagatcggcggtgtggacaccaccgcgcaccaggtctccttcaatgccagaggaaccttt
gaggcatcccccatggttaacagccagacgggaacgggtgtgaacagctggattaccaac
aacaataatgctgctcaacagagcaaggaccttgtggactctttcatgataccttcaacg
ttattgggagtggacgacttcagatatattgatgaggaatctgaaatttga
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