Polyodon spathula (Mississippi paddlefish): 121302833
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Entry
121302833 CDS
T07273
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121302833
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M10
121302833
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_4
Reprolysin_3
DUF4953
Peptidase_M66
Zn_peptidase_2
Motif
Other DBs
NCBI-GeneID:
121302833
NCBI-ProteinID:
XP_041089030
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Position
30:2495605..2501151
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AA seq
478 aa
AA seq
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MKMKINCLEVSVLIALACTALPAAVPVNPKSENNEGDFQFAEGYLNRFYTISTVKSRSRG
PVTETLKRMQSFFKLNVTGTLDRETMEVMKRPRCGVPDVAKYSFLSSNSKWSTNKITYRI
VNYTPDLTVADVDQTIAKAFKVWSDVSPLTFTKINSGTADIMISFGTKSHGDLFPFDGPS
GTLAHAFGPGSDIGGDAHFDEDETWTTTSRSINLFLVAAHEFGHALGLDHSTNPSALMFP
TYSYVPTERYKLPTDDVNGIQALYGKRTVIPPQPTTKPPQKAVPEPQSSPSEPNHCDPNL
TLDAVASLKGDLLIFKGSDFWRKSRSDVTEESIKANWPQLPSDIDAAYELDGGNTLLAFK
GSQFWVVFENGFNVFKYGIGLLGFPRTVTQIDAAVHIEETGQTLFFVGKYYYSFNERTRR
MAYQSTISSRFPGIGSRVDAAFVMSGNYYFSSGPFLYQYDIKSRRVISTQGNSALLDC
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagattaattgtttggaggtttcggtgctgatcgctttagcgtgcacggcg
ctgcccgcggctgtgccagtcaatcccaaaagtgaaaacaatgagggtgatttccagttt
gcagagggatacctaaaccgtttctataccataagcaccgtcaaaagccgaagcaggggc
ccagtcacagagaccctgaaacgcatgcagtcattcttcaagctcaatgtcaccgggact
ctggacagggagaccatggaggtcatgaagaggcccagatgtggggttccagatgttgca
aaatacagttttctttcatcgaattcgaaatggtcaactaataaaataacatacagaatt
gtaaactacactcccgatctgacggtagcagatgtggatcaaaccattgcaaaggctttc
aaagtctggagtgacgtctctcctctcaccttcaccaaaatcaacagtggaacggctgac
atcatgatctcttttggaactaaaagtcacggtgatctttttccctttgacggtccctct
ggaacactggctcacgccttcggacctgggagtgacattggtggagatgctcactttgac
gaagatgaaacgtggacaacgacttcgagaagtatcaacttgttccttgttgctgcccat
gaatttggacacgcgctgggactagatcactccacaaatccatcggcgttgatgttcccc
acctatagctatgttcctacagaaagatataaactcccaactgatgatgtgaatggaatc
caagctttgtatgggaaacgtacagttattccaccccaaccaacaaccaagccccctcag
aaggccgtgcctgaacctcagtcttcaccctctgagccgaaccactgcgatcccaacctc
actctggatgctgttgcttcactgaagggggatctgcttatcttcaagggcagcgacttc
tggagaaaaagccgcagtgatgtgactgaagagtcaatcaaggccaactggccacaactt
ccctcagacatcgatgctgcttatgaattagatgggggaaatactctactggcatttaaa
ggatctcaattctgggtggtctttgaaaatgggtttaatgttttcaaatatggcattggt
ttgctggggtttccacggacggtcacacagattgatgcagcagtgcacatcgaggagacg
ggacaaactctgttttttgttgggaaatactattacagtttcaatgaaagaacaagaaga
atggcgtaccagagtacaatttcaagtcgctttccaggaattggatcaagagtggatgct
gcctttgtaatgtctggtaactactacttctccagcggccccttcctctaccagtatgac
atcaagagcagaagagtcatcagcacacaggggaactcagcattgctcgactgctaa
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