Polyodon spathula (Mississippi paddlefish): 121303099
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Entry
121303099 CDS
T07273
Name
(RefSeq) semaphorin-4C-like
KO
K06521
semaphorin 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121303099
CD molecules [BR:
pspa04090
]
Proteins
121303099
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_3
I-set
Herpes_UL43
Motif
Other DBs
NCBI-GeneID:
121303099
NCBI-ProteinID:
XP_041089482
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Position
31:313027..342508
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AA seq
838 aa
AA seq
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MGGVCVPLGVALLLGALTGGSWGLDWDPVPRKTVLRNSLKGVRRFSSPSVFNYTTLTLDE
VSGFLYVGAREAAFALDMNNVELERKPSIMWGAPTDKKTECVLKGKNNQTECFNHIRFLQ
NFNRTHMYCCGTYAFQPKCAYIDTSRFTLELSSMEDGKGKCPYDPAKGHTGLIVDGELYS
ATLNNFLGTEPVVLRNVGGHYSMKTEYLPSWLNEPDFVGSSFVPESVDSPIGDDDKIYFF
FSERAVELDCDSDLVVTRVARVCKGDVGGARTLQKKWTSFLKARVLCSLPERQVHFNRLQ
AVFTLRLAEGWQHSSFYTVFRAQWGDVDVSAVCQYHIDDIKKVFDGPYKEYREPAQKWGR
YTNQVPVPRPGACITNWHRETGFNSSLQLPDNTLNFAKKHPLMDDKVSARPLLVKKSVNF
TQIAVDRVSAIDHRRYDVLFIGTAEGWLYKAVSLGSEVHLIEELQLFEEPQPVESLAISH
KEKLLYVGSRSEVLQLPLADCGKYRSSPDCTLSRDPYCAWDREGKSCVRTDKHPSHFSLD
QDILQEGFKGQARAKFEQSPIPNSDKAKPKNVTVVLGSDLVLPCQQISNLAHPLWLFNDL
QLVPGQGVRVESRLGSLVIEGAGAGEAGRYTCLSQERGERFLAERYAVSVVASAPVFMEA
RAPDGILGLVWVLVITLASACLLLLGSVLYLRRRLKQDKGSELMKPLESTLVYPISLPRE
PTHFVASKGSDSELWDNSSYYYSDGSLKIVPGHAPCPSTTPGSGIPGQPLPSTAAVNSPN
RLSLGNIRGSGSNGYIRLNLSSGGEERAEFSAPFTEELRKTLKQRSVLPDTNPEESSV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggtctgtgtgccgctgggcgtggctctgcttttgggtgcgctgactgggggg
tcctggggtctggactgggaccctgtcccccgcaagaccgtcctgcgtaacagtttgaaa
ggggttcgtcggttctccagtcccagtgtgtttaactacaccaccctgacgctggatgag
gtctcggggttcctgtatgtcggggcgcgagaggcggccttcgccctcgacatgaataac
gtggagctggaacgcaaaccctcgatcatgtggggcgccccgactgataagaagactgag
tgcgtcttgaaggggaagaacaaccagacggagtgttttaatcacatccggttcctgcag
aacttcaaccggacccacatgtactgctgtggaacctacgccttccagcccaaatgcgcc
tacattgacacgtcccgcttcactctggagctctcctcgatggaggatggaaaggggaag
tgtccctacgatccagccaagggccacactggtctcattgtggatggggagctgtactcc
gccacgctcaataacttcctggggacggagccggtggtcctgaggaatgtggggggacac
tactccatgaagacagagtacctgccgtcctggctcaacgagcccgatttcgtgggctcc
tcctttgtcccggagagtgtggacagtccgatcggagacgatgataagatctacttcttc
ttcagtgagcgcgccgtcgagctggactgcgacagtgatctggtggtgacgagagtcgca
cgcgtctgcaagggcgatgtgggaggggcccgcactcttcagaagaagtggacctcgttc
ctgaaggctcgggtcctgtgctccctcccggagaggcaggtccacttcaacaggctgcag
gccgtgttcacgctgaggctggccgagggctggcagcacagctccttctacacggtgttc
agagcgcagtggggtgatgtggatgtctccgctgtgtgtcagtaccacatcgatgacatc
aagaaggtgttcgacggcccttacaaggagtaccgtgagccggcacagaagtgggggcgc
tataccaaccaggtgccagtccctcggcctggagcgtgcatcactaactggcaccgagag
accgggttcaacagctccctgcagcttcctgacaacacgctgaacttcgccaagaaacac
ccgctgatggacgacaaggtgagcgcgcgccccctgctggtcaagaagagcgtcaacttc
actcagatcgctgtggaccgcgtctccgccatcgaccaccgccgctacgacgtgctgttc
atcgggacagcggagggctggctgtacaaggcagtgagtctgggttcagaggtccactta
attgaggagctgcagctgtttgaggagccgcagccagtggagagcctcgccatctcccac
aaagagaagctgctctatgtgggctctcgttccgaggtgctgcagctgcccctggctgac
tgtgggaagtatcgctcctctccggactgcacgctgtcccgggacccctactgcgcctgg
gacagggagggcaagagctgcgtccggacagacaagcaccccagccacttctccctcgat
caggacatcctacaggaagggttcaaggggcaggcgcgggccaaattcgaacagagtccc
atcccaaactcagacaaagccaagccgaagaacgtgactgtggtgttgggctcggacctg
gtcctgccctgccagcagatctcgaacctggcccaccccctgtggctcttcaacgacctc
cagctggtcccggggcagggcgtccgggtcgagtcccggctggggtccctggtgatcgag
ggcgcgggtgcaggggaggcggggcgctatacctgcctgtcccaggagaggggggagcgc
ttcctggccgagcgctacgcggtctccgtggtggccagtgcccccgtgttcatggaggcg
cgcgcgccggacgggatcttgggtctggtgtgggtgctggtgatcactctggcctccgcc
tgcctcctgctgctgggctccgtgctttacctgcgcaggaggctgaagcaggacaagggc
tcggagctcatgaagcccctggagagcacgctggtctaccccatcagcctgcccagggag
cccacccacttcgtagccagcaaagggtcagactcggagctgtgggacaacagcagctat
tattactcggatggctccttgaagatcgttcccggccacgccccctgtcccagcacaacc
ccgggcagcgggatccccggccagcccctccccagcaccgcggccgtgaactcccccaac
cggctcagcctgggcaacatcaggggctccggcagcaacggctacatccggctgaacctg
agcagcggaggggaggagcgggcagaattcagcgctcccttcacggaggagctgcggaag
acgctgaagcagaggagcgtgctgcccgacaccaacccagaggagtcttcagtgtag
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