Polyodon spathula (Mississippi paddlefish): 121305479
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Entry
121305479 CDS
T07273
Name
(RefSeq) troponin C, slow skeletal and cardiac muscles-like
KO
K05865
troponin C, slow skeletal and cardiac muscles
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04814
Motor proteins
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121305479
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121305479
04820 Cytoskeleton in muscle cells
121305479
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121305479
04261 Adrenergic signaling in cardiomyocytes
121305479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121305479
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
121305479
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
EF-hand_9
AIF-1
EF-hand_4
SPARC_Ca_bdg
DUF5580_M
EMG1
B
Motif
Other DBs
NCBI-GeneID:
121305479
NCBI-ProteinID:
XP_041093055
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Position
43:1625201..1638868
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AA seq
290 aa
AA seq
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MGGEGRGPSPGAVGQVMGGEELPLPPQPEGDYLQLSPLPPEGHSLLLLPPPPGELKFLAS
RCKDQLLPEPATPSPPRAAEPASPGEVVSPSPGEVSSPSLATAFELQEILGLEPKRRELP
ATEKGESFIGTFFLSLQVENLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQN
PTPEELTEMIDEVDEDGSGTVDFDEFLVMMVRCMKEESKGKSEEELAELFRMFDKNCDGY
IDLEELKMMLEETGETITEDDIEELMRDGDKNNDGKIDYDEFLEFMKGVE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgggaggggaggggaggggcccctccccgggggcggttgggcaggtgatggggggagaa
gagctaccgctacctccacaaccagagggagactacctgcagctctcgcctctaccacca
gagggacactccctgttgctccttccaccaccaccaggggagctgaagttcctggcatct
cgttgcaaggatcaactcctgcccgagcctgccacaccttccccacctagggctgccgag
cctgcatcacctggggaggtcgtctcaccatcgcccggagaggtcagttcgccatcgctt
gcaacagcatttgagctgcaagaaattctggggctggagcccaagagaagggagctacca
gctacagagaagggggagagtttcatcggtaccttctttctctcccttcaggttgagaat
ctgactgaagagcagaagaacgagtttaaggctgccttcgatatctttatccaggacgcg
gaggatgggtgcatcagtacgaaggagctggggaaggtgatgaggatgctggggcagaat
cccacaccagaggagctgacagagatgatagatgaggtggatgaggatggcagcggcacg
gtggatttcgatgagttcctcgtcatgatggtgagatgtatgaaggaggagagtaagggc
aaatcagaggaggagctagctgaactcttcagaatgttcgacaagaactgtgatggctac
atcgacctggaggagctgaagatgatgctggaggagacgggagagaccatcactgaggac
gacatcgaggagctgatgagagacggggacaagaacaacgatggcaagatcgactacgac
gaattcctggagttcatgaagggagtggaataa
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integrated database retrieval system