Polyodon spathula (Mississippi paddlefish): 121307223
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Entry
121307223 CDS
T07273
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1-like
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121307223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121307223
04090 CD molecules [BR:
pspa04090
]
121307223
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
SIRP family
121307223
CD molecules [BR:
pspa04090
]
Proteins
121307223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
V-set
ig
C2-set_2
C2-set_3
Ig_2
I-set
SIT
Psg1
TMEM154
Motif
Other DBs
NCBI-GeneID:
121307223
NCBI-ProteinID:
XP_041095295
LinkDB
All DBs
Position
54:complement(744209..766611)
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AA seq
334 aa
AA seq
DB search
MQGRGPVTGGPPGPLRWYRDTGSGRQYLYSTIPPSNERNDPRVSQVHPNHPTDLSIRIVR
LTPRDSGMYYCDKYTVFDGSLIASGAGSRLSVQVKPDVSIEAKPERVKVNESVSLTCRAR
GFYPGRVNVSWVQQGGAEELAAERGENAENEDGTFSRDSVLNVTVTQELSAATVSCRVQI
EGLLETVQREHTLVMTDLKPDPDRGTVSGIAIPAAVTLVVLIALLLAVGLYCRFRAGKKK
AEIVRPPVLSNETHEKELTYASLDLQKKSSRHSMMVAESEVCAYAEIKGAKARNDLTYAS
LDKANLKKKKEEPGGEGEPPGGGTEYASVNFRKN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggagaggtcctgtgacagggggtcctccaggaccactgagatggtacagggac
actggcagcggcagacagtatctctactctacaatccctccatccaatgagagaaacgac
ccccgcgtgtctcaagtacatccaaaccaccccacagatctctccattcgaattgtgagg
ctgaccccgcgtgactcaggaatgtattactgtgataaatacacagtgtttgatgggtcc
ctcattgctagcggcgcagggagcaggctgagtgttcaagttaaacctgacgtctccatc
gaagcgaagccagagagagtgaaagtgaacgagtccgtctccctcacctgccgtgcgcgt
ggcttctacccggggagggtcaatgtgtcctgggtccagcagggcggcgctgaggagctt
gctgcagagaggggagagaatgcggagaatgaggacgggaccttcagtagggacagtgtg
ctgaatgtcactgtcactcaggagctcagtgcagccacagtgagctgcagggttcagata
gaaggactgctagagaccgttcagagagaacacacactggtaatgactgatctcaaaccc
gatccagaccgtggcactgtctctgggattgcgattcccgcagccgtcactctcgtcgtt
ctcatcgcgcttctgcttgctgttggactctactgtcgattccgcgcagggaagaaaaag
gctgagatcgtgaggcctccagtgttgagcaatgaaacacatgaaaaggagctgacgtac
gccagcctggatttgcagaagaagtccagtcggcattcgatgatggtggcagagtcggag
gtctgtgcgtacgccgagatcaaaggggcgaaggccaggaatgacctcacatacgccagc
ctggacaaggcaaacctgaagaagaagaaggaggagcccggaggagaaggggagccccca
gggggagggacggagtacgcctctgtgaacttcaggaaaaactga
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