Polyodon spathula (Mississippi paddlefish): 121308385
Help
Entry
121308385 CDS
T07273
Symbol
bfsp2
Name
(RefSeq) phakinin isoform X1
KO
K10379
phakinin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121308385 (bfsp2)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
121308385 (bfsp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ANC1_spectrin
CCDC39
DUF7436
TPR
Fez1
Rab11-FIP3
DUF7310
TBCC_N
FKBP15
TolA_bind_tri
CC_Bre1
DUF7491
PUMA_CC
Phage_GPO
ACBP4_C
DUF603
CCDC138_cc
Motif
Other DBs
NCBI-GeneID:
121308385
NCBI-ProteinID:
XP_041096683
LinkDB
All DBs
Position
3:38825050..38835720
Genome browser
AA seq
444 aa
AA seq
DB search
MPLPRRRSSFLGQQVQAPQADCPTGGSRRVSIGTSSGGYFRAPGVYVGMVPIGGASSLGT
RVSRRALGISSVFMQGLRSTNPVIMTQGLERSCSPTFESLNGCLLEYMEKVRALEQVNRE
LEEQIRVYLDKKASSAGSWGTLRQDWDDIYRQVSDSILDNARLMLQTENVQASAEDFKDR
YENEQPFRRAVEDEINSLYKVIDDAHLTKMDLESQIENMREELDALTKGHEKDVKVLFNQ
LAGSQLDEADAPIETSLDHILEYIRAHWEKAIERNRTETDAYLEYNQQSESVNAKLSQKE
EEVESLRTECNDIGCKIQSLQAETESMRALKRGMENSLYDAKHWHDIELQNLGSVISKLE
AELSEIRGEVDQQKKDYETLLSNRMKLELEIGSYHGILDGEESRYHPHKLVHGDPADSKG
QPASHDSETQDPEPSTTGFSTSQK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccaagacgtaggtcttctttccttggccaacaggtccaggccccccaagct
gattgccccactgggggaagccggagggtcagcattgggacaagcagtgggggctatttc
cgggctccaggggtctatgtggggatggtgcccatcggtggagccagcagcctgggcacc
cgggtgtcccgtcgagccctgggcatcagcagcgttttcatgcagggccttcgcagcacc
aacccggtcatcatgactcaagggttggagaggagctgcagccccacctttgagagcctc
aatggttgcctgctcgaatacatggagaaggtgcgggctctggagcaggtgaaccgggag
ctggaggagcagatcagggtctacctggacaagaaagcttccagtgctggcagctgggga
acactgaggcaagactgggacgacatctacagacaagtgagtgattcaatcctggataat
gctcgcctcatgcttcagacagagaatgttcaagccagtgcagaggattttaaagacaga
tatgagaatgaacagcctttccgcagagccgtggaagatgaaattaactccttgtataaa
gtgattgatgatgctcatttaactaaaatggatctggaaagtcagatagagaacatgagg
gaggaacttgatgctctgacaaagggccatgaaaaggatgtgaaagtgctttttaaccag
cttgctggtagccagctggatgaagcagatgctccaattgagacaagtctggaccatatc
ctggaatacataagagctcactgggagaaagctatagaacggaaccggacagaaactgat
gcttatctggaatataatcagcagtctgagagtgttaatgccaagctgagccagaaagag
gaagaagtggagtcactaaggacggagtgcaatgatattggatgcaagattcagagcctg
caagcagaaacagagtccatgagagcactgaaacgggggatggagaattccttatatgat
gctaagcactggcatgatattgaactgcagaatttgggctctgtaatttctaagctggaa
gcagagctgagtgaaatccgaggagaagtggatcagcagaagaaagactatgaaaccttg
ctgagtaacagaatgaaactagaattggagatcggctcttaccatggcatcttagatgga
gaggaaagcaggtaccatccacataagttagtccatggagacccagcagatagtaaaggc
cagcctgctagccacgattcagaaacacaagacccggaaccttccacaacaggtttttct
acaagtcaaaaatag
DBGET
integrated database retrieval system
