Polyodon spathula (Mississippi paddlefish): 121313571
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Entry
121313571 CDS
T07273
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03030
DNA replication
pspa03420
Nucleotide excision repair
pspa03430
Mismatch repair
pspa03440
Homologous recombination
pspa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121313571 (rpa3)
03420 Nucleotide excision repair
121313571 (rpa3)
03430 Mismatch repair
121313571 (rpa3)
03440 Homologous recombination
121313571 (rpa3)
03460 Fanconi anemia pathway
121313571 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121313571 (rpa3)
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121313571 (rpa3)
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121313571 (rpa3)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121313571 (rpa3)
MMR (mismatch excision repair)
121313571 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
121313571 (rpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
121313571
NCBI-ProteinID:
XP_041102181
LinkDB
All DBs
Position
3:complement(86703543..86705753)
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AA seq
121 aa
AA seq
DB search
MGDIMESPRVRINSSMLSQYINKPVCFVGRVEKVHQTGTSFLLSDGDGKNASVELSEPLM
EELSGIVEVLGRVTTKATIMASTYMPFREDQNSFDLGLYNEALKVIHDFPQYYPFEVRAS
E
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgggagatatcatggaatcgcccagagtccgtatcaacagcagcatgctctctcagtat
atcaacaagcctgtctgttttgtggggcgagtggagaaggttcaccaaacaggcacctct
ttccttctttcagacggagatggtaagaatgcatcagtcgagctcagtgaacccctaatg
gaagagttaagtggcattgtagaggttttaggacgagttacaacaaaagcaaccatcatg
gcgagcacatatatgccattccgggaagaccagaacagttttgacttgggtctttacaat
gaagcactgaaagttattcatgatttcccccagtactatccttttgaagtaagggcaagt
gaatag
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