Polyodon spathula (Mississippi paddlefish): 121314684
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Entry
121314684 CDS
T07273
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121314684 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121314684 (tex10)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
121314684 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_MROH2B_C
HEAT_GCN1
DOP1_C
MMS19_C
TPR_CAND1
HEAT_2
HEAT_GCN1_C
HEAT_EF3_N
HEAT_DAAF5
HEAT_EZ
TPR_IPO5
MMS19_N
Motif
Other DBs
NCBI-GeneID:
121314684
NCBI-ProteinID:
XP_041104125
LinkDB
All DBs
Position
4:58912936..58966600
Genome browser
AA seq
934 aa
AA seq
DB search
MSKKRKRQDDFQKVKLKVGKKKPKPDNATNVNFKTKGIHLPDQLKRDGALPTNHRQLNVK
DLLTQMHHYSPGVKLSALTGLKDLLSQHASVLDTHLSSILSEVAAVFTDKDPPVRAAAIR
LLHFLGPRVAPEHIAPFFPLVSAHLSSAMTHITDGIQEDALKVLDVLLEHYPQLLTGRST
VLLKNFVELISHQRLSKAVKGGRAGKGPSWMLSVSPGRRLTSQQWRLSVLFRLSKYLQAL
AEEQGGAGEDGRQVPSDEREKGKAGSGFVTMLEVTWDEHSYGTKGIQVYENSGAQPSVRS
CFRLRPVSGVSAEEGLSSVESLKGFVQTLVPLLLECWVEASPADQAASSPGNLVESEAML
LMHQVLWIIQLLRTLVQLYDHSRNMDSWFRTNYLNDFKHHFMKNFPYSQFDIPKKKKGDS
KRNKQTAALLASVDALALNLALSQVMVSLTSSTVVQQDSDWLEAIRKFVTHSLSSGSKLS
SKQLSGLLEVVWRLALTQRNRAVTEELLRAVHVQYQQRSLTLPVRMQLLRFFSGLYLKEK
EANPQIARSKVLSRWLSGLPLQLAQLGGRNTQLSAQLIETIHAAASRSNRELLQSLQTQA
CRLYDPEDGSVVLLPPESQQRLVQLLYFLPSLPSDLLSCLSHCCSMGRVSSSLAGALFRI
VHMRSSFSGWTGCVQETAVTDVDYFSFLFSSLTGFSGDELALIQRGNEDGHSSRMQLSPV
LLYPTDLEQFGHHWDVAQEVCHCLETVSSRPQCFDILQNAICKNLAGLRVVPDSTAVAVL
SAVSRLLVLAYIPSEVLLRFLASCCYSLLHHLLTLEKSAAEDSAHKREVVWGACLAALSG
VPRVLRLMLQSLRVTDACQEELPVIAQILRLLLQHAQLRNHMMANAALLQQIVQEITRFR
STEAREQWLVDLHYCFSVCFSSQPRGPAATRENY
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaagagaaaaaggcaggatgattttcagaaggtgaaactcaaggttggcaag
aagaagccgaagccggacaatgctacgaacgttaacttcaagaccaagggcatacacctt
cctgaccagcttaagagggacggggcgctgccaaccaaccacagacagctcaatgtgaag
gacctcctgacccagatgcatcactacagcccgggggtgaagctgtctgctctgacgggg
ctgaaggacctcctgtcccagcatgcttcggtgctggatacccacctctccagcatcctg
agcgaggtggcggccgtcttcacagacaaagaccctccagtgcgggcagctgccatccgc
ctcctgcatttcctagggccccgtgtggcccctgagcacatcgcccccttcttcccgctg
gtgagtgcccacctgtccagtgccatgacccacatcaccgatggcattcaggaggatgca
cttaaggtactggacgtactgctggagcactaccctcagctgctcaccggccgtagcact
gttctgctcaagaacttcgtggagctgatctcacaccagaggctctccaaagctgtgaag
ggagggcgggcggggaagggccccagctggatgctgtcggtcagccccggccgcaggctc
acctctcaacagtggagactcagtgtgctcttcaggctgagcaagtacctccaggccttg
gcagaggagcagggtggagcaggggaggacgggcgacaggtcccctcggatgaaagggag
aaggggaaggccggctccgggtttgtcaccatgctggaggtgacctgggacgagcacagc
tacgggacaaaaggaatccaggtgtatgagaactctggggctcagccctctgttcggtcc
tgcttccgtctcaggcctgtgtcaggggttagtgctgaagaggggctgtcctcggtggag
agccttaagggctttgtgcagacgctggtccctctgctcctggagtgctgggtggaggcc
agccctgctgaccaggctgcctccagcccggggaacttggtggagagtgaagccatgctg
ctcatgcaccaggtgctctggatcatccagctgctgcgcacactggtccagctctacgac
cactctcgcaacatggattcttggtttcgaaccaactacctgaatgacttcaagcaccat
ttcatgaagaactttccatactctcaatttgacattcccaaaaagaagaaaggtgacagt
aaaagaaataagcagactgctgctcttctggccagtgtagatgcgcttgctctcaatctg
gcgctgtcccaggttatggtgtcactgaccagctccactgtggtccagcaggattctgat
tggctggaggccatcaggaagtttgtgacccacagcctatcgagcggcagcaagctgagc
tccaagcaactgagtggattgctggaagtggtctggaggctggcactgacgcagaggaac
agagctgtgaccgaggagctgctgagagctgttcatgtgcagtaccagcagagaagcctc
actctgcctgtgcgcatgcagctgctgcgcttctttagcggcctctacctcaaagagaag
gaggccaacccacagattgccaggagcaaggttttgtctcgttggctgtccggtctgccc
ctccagctcgctcagctgggtggcaggaacacccagctctctgcccagctcatcgagacc
atccatgcagcagcctcccgatccaacagagagctgctgcagagcctccagacccaggcc
tgccggctgtatgatccagaagatggcagtgttgtcctactccctccagagtctcagcag
cgtctggtccagctgctgtacttcctgccctccctcccctccgacctgctgtcctgcctg
agccactgctgctccatgggccgcgtctccagcagcctggccggcgcgctcttcaggatc
gttcacatgaggtcttccttctctggctggacaggctgtgttcaggagactgctgtgacg
gatgtagactacttcagcttcctcttttcctctctcacaggtttctccggggatgagctg
gccttgattcagagaggcaatgaggatggtcacagcagccggatgcagctctcccctgtc
ctgctctacccaaccgatctggagcagtttgggcaccactgggatgtggcgcaggaggtg
tgccattgcttggagactgtctcatctagacctcagtgctttgatattctccagaatgct
atctgcaaaaatttggctggtctgcgtgtggttcctgacagcacagcggtggcggtcctc
agtgcagtttccaggctgcttgtcctggcctacatccccagtgaggtgctgctgcgcttc
ctggccagctgctgctacagcctcctgcaccacctactgaccctggagaagagcgcagct
gaagacagcgcacacaaaagggaggtggtgtggggtgcgtgcctagcggctctgagtggg
gtcccccgtgtgctcagactgatgctgcagagcctgcgagtgacggacgcctgtcaggag
gagctgccagttatcgctcagatcctgcgcctgctgttgcagcatgcccagctccgcaac
cacatgatggccaacgcagcactgctgcagcagattgtccaggagatcacgaggtttcgc
agcactgaagcccgggagcagtggctggtggatcttcattactgcttcagcgtgtgcttc
tcctcgcagcccagaggccctgcagccacccgggagaactactga
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