Polyodon spathula (Mississippi paddlefish): 121314895
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Entry
121314895 CDS
T07273
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121314895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pspa04050
]
121314895
Cytokine receptors [BR:
pspa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121314895
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Ephrin_rec_like
RANK_CRD_2
Motif
Other DBs
NCBI-GeneID:
121314895
NCBI-ProteinID:
XP_041104572
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All DBs
Position
4:77537971..77551701
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AA seq
429 aa
AA seq
DB search
MGVVSNIMRSQQPVPAAMKLANWYCTHVLLLAVSFTWAVHEMPAPTYQHWDPVTSHSFTC
DQCPPGTFVQHHCNANRKTVCSPCPAHHYSENWHWDEECQYCTLVCKEKQNFQHECNSTH
NRLCKCIEGYHLEIEFCIKHSSCRSGYGVKKPGTSEDDTVCERCPKGYYSNELSATKPCI
KHTNCAELGLRTSSPGTATRDAVCDTNEKGSLSQCFHNQLECYTDITLCEEAVFQFIASQ
GLPAYQLDMLMDSLPGQKVDGRNIEMVKKMCNPKQQTIHLLKLWMNQNKDQDKIYSIYQD
MNQCERVVSRCPGFRNLTLDHFNVVKESLPGNKVKEEDIRWILKTCDPKQYIPQLLSLWK
AQNADQDTANVLSQSIKKLRSQKVPKKLLQSLRRIVKIFNNSAIHRIYQKMFLEIIQGSK
CLKAKSFNE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtagttagcaacatcatgaggtcacaacagcctgtgcctgccgcaatgaaactt
gcaaactggtactgcacacatgtcctgttgttggctgtttcatttacttgggctgtccat
gagatgcctgccccaacatatcagcactgggatccggtaacatctcactcttttacctgt
gaccaatgccctcctggtacttttgttcaacatcactgcaatgcaaatagaaagactgtg
tgttcaccctgtccagcgcatcactattcagagaactggcactgggatgaagagtgccag
tactgcactttggtgtgcaaggagaagcagaactttcaacatgagtgcaacagcacacac
aaccggctctgcaaatgcattgagggatatcatcttgaaattgaattctgtataaaacat
agttcctgtcgctctggatatggtgtaaagaagccaggtacatcagaagatgacactgtt
tgtgagaggtgccccaagggctactattcaaatgaactttcagctacaaaaccctgcatt
aaacacacaaactgtgctgaactggggttgagaacatcttctccaggaactgcgacacgt
gacgcagtgtgtgacacgaatgagaaaggctccttatctcagtgctttcataatcagctt
gaatgttatacagatattacactctgtgaggaggccgtgttccagttcatagcatctcaa
ggtttacccgcttatcagctggatatgttaatggacagtttgccaggtcagaaagtggat
ggcagaaatatagaaatggtcaaaaagatgtgcaaccccaagcaacagacaattcatctg
ttaaaactgtggatgaaccaaaacaaagaccaggacaaaatctacagcatttatcaagac
atgaatcagtgtgaaagagttgtttccaggtgcccaggctttaggaacttgacattggac
cattttaatgtagtgaaggaaagtttgccagggaacaaggtgaaggaagaggatatcaga
tggattttgaaaacctgtgatcccaagcagtatattccccagctcctgagtctgtggaag
gcacagaatgcagaccaagatactgcaaatgtgctttctcaaagcattaagaaactcaga
tcccagaaagtgccgaaaaagcttctgcaaagccttaggagaattgtgaaaattttcaac
aactctgcaatacacagaatttaccagaaaatgtttttggaaattattcaggggagtaag
tgtttaaaagccaaatcctttaacgaatag
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