Polyodon spathula (Mississippi paddlefish): 121315541
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Entry
121315541 CDS
T07273
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121315541 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
Patched domain-containing proteins
121315541 (ptchd4)
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GFIT
Motif
Pfam:
NPC1_MLD
Patched
DUF676
Motif
Other DBs
NCBI-GeneID:
121315541
NCBI-ProteinID:
XP_041105648
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All DBs
Position
5:complement(10829936..10860104)
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AA seq
385 aa
AA seq
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MCFVGRNGASANWIWRRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
VSRFKPETDLEILVSPTHSLAKIERSLANSLFPIEQSKNKLYSDLHTPGRYGRLILLSKS
RENILELPNQVLQVHKSVLDLKVNYKGFNYTFAHLCVMSNRDKTCLLDDIISIFEDLQQA
AASNSTPSRVQVSYPNTRLKDGRISFIGHQLGGVTFAANSKDQQFRTARAVQITYYLHNY
GNANQDIIAEKWENEFCKLLLKLSAVNEDIYIQSLTSFSLWRDFNKTGMLARSEVLVSLV
LILLAATVSSSMRDCLRGKPFLGLLGVFTVCIANVTAAGIFFITDGKYNSTLLGVPFFAM
DWCDRADGFPALKRSPPTSRLLQGW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcgtaggaagaaacggggcatctgcaaactggatctggaggaggatgctgcgg
caagtgattcacagagggctcaaagcttctttttactggctcggcttatttgttagcagg
catccagtttttttcctcactgttcccgccgtcttaactatcatcttcggatccaccgtc
gtgagcaggtttaaacccgaaacagacctagagattctggtttccccgacccacagcctg
gcaaaaatagaaaggagtctggcgaacagtcttttccccatcgagcagtccaaaaacaag
ctgtattcagacctgcacactcctggcagatatggcaggttgatcctgctctcgaaatcc
agggaaaacattttggagctgcccaaccaggtcctgcaggtacacaaatcagtgctggat
ttgaaagttaattataaaggttttaattacactttcgctcatctgtgtgtcatgagcaat
cgggataagacatgccttttggatgatattatttcgattttcgaggacctccagcaagct
gccgcttcaaatagcacaccttccagggtgcaagtcagctatccaaacaccagattaaag
gatggtaggatctctttcattggccaccagctgggaggggtcacattcgctgcaaatagc
aaagatcagcaattcaggactgccagagcggtccagatcacttactacctccacaactat
ggcaacgcaaaccaggacatcattgctgagaaatgggaaaatgaattctgcaagctcttg
ctcaaactctcagcagtgaacgaagacatttatatacaatcactgacctcattcagtctc
tggagagattttaataaaacaggcatgttggcaaggagtgaggtgttggtgagtctggtg
ctgattctgttggcagccacagtctccagttctatgagggactgccttcgaggaaagcct
ttccttgggctgctgggagtttttactgtctgcatcgccaatgttactgcagcagggata
tttttcattacagatggaaagtataattctacactgctgggagtccccttctttgctatg
gattggtgtgacagggcagatggattccctgcactgaaaaggtcacctcccaccagtagg
ctgctacaaggctggtag
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