Polyodon spathula (Mississippi paddlefish): 121316057
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Entry
121316057 CDS
T07273
Name
(RefSeq) talin-1-like isoform X1
KO
K06271
talin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121316057
09142 Cell motility
04820 Cytoskeleton in muscle cells
121316057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121316057
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121316057
Exosomal proteins of other cancer cells
121316057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_VBS2
VBS
Talin_middle
I_LWEQ
Talin_R4
FERM_f0
IRS
FERM_M
FERM_N
RA_2
ACBP
PH_SLA1
TrcR
SNX17-31_F2_FERM
DUF7783
Motif
Other DBs
NCBI-GeneID:
121316057
NCBI-ProteinID:
XP_041106717
LinkDB
All DBs
Position
1:complement(25480052..25571346)
Genome browser
AA seq
2562 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRIIRERVPEAQTGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKHRPLKIRMLDGTVKTVMVDDSKIVGDMLMTVCARIG
ITNYDEYSLVHDIVEEKKEENYGTLKKDKTLMRDDKKMEKLKQKLHTDDDMNWLDHGRTL
REQGVEETETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFAG
FQCQIQFGDHNEQKHKPGFLDLKEFLPKEYIKNKGEKKIFQAHSNSQSMTEIEAKVSYVK
LARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTVLQQQFNRVGKVEHGSVALPAIMRSGAGGPESFQVGTMPQAKQHITSGQM
HRGHMPPLTSAQQALMGTINSSMHAVQAAQATLDEFDTLPPLGQDAASKAWRKNKMDESK
HEIHSQVDAITAGTASVVNLTAGGPADTDYTAVGCAVTTISSNLTEMSKGVKLLAALVED
EGGNGHNLLHAAKNLACAVSDMLKTAQPASTEPRQALLQAAGNVGQASGDLLQQIGESEA
DPRFQFFLGKGSLRNTTRSVSPYSQRMDMLMHLAKAVANAAAALVLKAKNVAQKTEDSGL
QNRVIAAATQCALSTSQLVACTRVVAPTISSPVCQEQLIEAGKLVAKSVEGCVEASQAAT
NDEQLLKQVGSAATGVTQALNDLLQHIKQYTTGGQPIGRYDQATDTILNVTENIFSSMGD
AGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKLLADATAKMVEAAKGAA
ANPDSEEQQQKLREAAEGLRIATNAAAQNAIKKKLVNKLENAAKLAAAAATQTIAAAQQA
ASTNKNPAAQQQLVQSCKVVADQIPILVQGVRGSQSQPDSPSAQLALISAGQNFLQPGAK
MVTAAKATAPTISDQASAMQLSQCAKNLATALAELRTAAQKAQEACGPLEIDNALNVVRN
LEKDMQEAKASAVEGKLKPLPGETLEKSSQDLGNSTKAVSSAIAQLLSEISQGNENYTGM
AARDLAQALKALGMAARGVAASTSDPQARNAMLDCASDVMDKSGNLIEETKRAVAKPGDP
DSQQRLAQVAKAVSQALNRCVNCLPGQRDVDNAIRTVGEASKKLLADSFPPSSKSFQEAQ
GNLNQAAVGLNQSANELVQSSRGTTQDLSRASGKFGQDFNEFLQAGVEMAGQSQSKEDQT
QVVTNLKTISMSSSKLLLAAKALSADPSAPNLKNQLAAAARAVTDSINQLITMCTQQAPG
QKECDNALRELETVRGMLENPTEAVNDLSYFDCIDSVMENSKVLGEAMAGISHNAKNSKL
PEFGNSISSASKALCGLTEAAAQASYLVGVSDPNSHAGQRGLVDPSQFARANQSIQMACQ
NLVDPACTQSQVLSAATIVAKHTSALCNACRLASSKTANPVAKRQFVQSAKEVANNTANL
VKAIKALDGAFSGENREKCRGATVPLIEAVDNLTAFASNPEFASVPAQISPEGLQAMKPI
VVAAKTMLESSTGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKNLITNMRDKAPGQI
ECDEAIEVLNRCIRDVDQASLAAVSQQLNPREDISQEALHDQVAAAVQEISILIEPIAVA
ARSEASELGHKVSQMASYFEPLVMASIGTASKIVDSQQQMNLLDQTKTLAESALQMLYTA
KEAGGNPKAAHTQEAVDESVLMMKEAVDDLSATLAEAASASGAVGGMVDSITQAINKIDE
GPDGEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSNTNPDELGSLANQLTSEFGQLAHEA
KPAAITAENEEIGSHIKNRVQELGHGCATLVTKAGGLQCSPNDAFTKKELIESARKVSEK
VSHVLAALQAGNRGTQACITAGSAVSGIIADLDTTIMFATAGTLNRENAETFADHRENIL
KTAKALVEDTKLLVSGAGSSQERLAQAAQSSVNTITKLAEVVKLGAASLGAEDPETQVVL
INAVKDVAKALGDLISATKGASGKPHDDPAMFQLKNSAKVMVTNVTSLLKTVKAVEDEAT
KGTRALEATIEHIKQELAVFNSKEPPPKTATPEDFIRTTKGITMATAKAVAAGNSCRQED
VIATANLSRKAIAEMLNSCKQAAYHPAVNKDVQTRALRYGKECAVGYLGLLEHVLVIIQK
PSHDLKQQLASYSKRVAGSVTELIQAAEAMKGTEWVDPEDPTVIAENELLGAAAAIEAAA
KKLEQLKPRAKPKEADESLNFEEQILEAAKSIAAATSALVKAASAAQRELVAQGKVGASP
ANAVDDGQWSQGLISAARMVAAATSNLCEAANSAVQGHASEEKLISSAKQVAASTAQLLV
ACKVKADQDSQTMKRLQAAGNAVKRASDNLVKAAQKAAFDAHDDEAVVVKSKMVGGIAQI
IAAQEEMLRKERELEEARKKLATIRQQQYKFLPTELREDEQN
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccctttcgctgaagattggcgttggaaacgtcgtgaagaccatgcagtttgaa
ccttccaccatggtttatgacgcctgccgcattatccgggagagggtcccagaggcgcaa
actggccagcctaatgattatggattgttcctgtcggatgaagacccaaagaaggggatc
tggcttgaggctgggaaagcgcttgattattacatgctgaggaatggggacaccttggaa
tacaagaagaagcacagacccctgaagatcaggatgttggatgggactgttaaaacagtt
atggtggatgattccaaaattgttggagatatgctaatgacagtctgcgccaggataggc
atcacaaactatgatgagtactcactggtgcacgacattgtagaggaaaagaaagaggag
aactacgggaccctgaaaaaggacaaaacactcatgcgagacgacaagaagatggagaag
ctgaagcagaagctccacactgacgatgacatgaactggctggaccacggacgcacgctc
agagaacagggcgtggaagaaacagaaacgctgcttctgaggaggaagttcttctactct
gatcagaatgtggattccagagacccagtgcagctcaatctgctatatgtgcaggctcga
gatgacatcctgaacggttcccatcctgtctccttcgaaaaggcctgtgaatttgcaggg
tttcaatgccagattcagtttggagaccacaacgagcagaagcacaagcccggattcttg
gatttaaaggagttcctgccaaaagaatacatcaaaaacaagggagaaaagaaaatcttt
caggctcacagcaatagccagagcatgacagaaattgaagcaaaagtgagctacgtcaaa
ttggccaggtctcttaaaacctacggagtgtcattctttttagtaaaggagaaaatgaaa
ggcaagaacaaactggtgccccgcttgctggggatcacaaaggagtgtgtgatgagagtc
gatgagaaaaccaaggaggtgatccaggagtggaacctcaccaatatcaagcgctgggct
gcgtcgcccaagagcttcaccttggattttggtgactatcaagatggctactactctgtt
cagacaactgaaggggaacagattgcacagctgattgctggctacattgatatcattctt
aaaaagaaaaaaagtaaggaccactttggcttggagggagatgaagaatcaaccatgtta
gaggactctgtgtcaccaaagaagtccaccgttctccagcaacagtttaacagggttggt
aaagtggagcacggctctgtggccttgccagccatcatgcgctctggagctggcggccca
gagagtttccaggtgggcaccatgccacaggccaagcagcacatcaccagtggacagatg
cacagggggcacatgcctcctctgacctcggctcaacaggctctgatgggtaccattaac
tccagcatgcatgccgtgcaagcagcacaggccacgctggatgagtttgacacattgcca
cctcttgggcaggatgctgcctccaaagcatggcgtaaaaataaaatggacgaatccaaa
cacgagatccattctcaggtggatgctattactgcaggaaccgcgtcagtggtcaatctc
actgcagggggtccagctgacacagactacacagcggtgggctgtgcagtgaccactatc
tcctccaacttgacggagatgtccaagggggtgaagctgcttgcggctctagtggaggat
gagggtggaaatgggcacaatctccttcacgctgcaaaaaacctcgcctgcgccgtctct
gacatgctcaagacagcccagccagccagtactgagcctcgtcaggccctgctccaggca
gcaggcaatgttggccaagcaagtggagatttactgcagcagattggtgagagtgaggca
gaccccagattccagttttttctaggcaaaggatcactcagaaacacaacacggagtgtc
tccccttatagtcaaaggatggacatgctgatgcatttggccaaagcagtagccaatgct
gcggccgctctcgtgcttaaagctaagaatgtggcccagaagactgaagactcagggctc
cagaaccgcgtgattgccgccgccacccagtgcgccctctccacctcccagcttgtagct
tgcacccgggtggttgcccccaccatcagctccccagtatgtcaggagcagctgatcgag
gcggggaagctggtggccaagtcggtggagggctgtgtagaggcatcccaggccgccacc
aatgatgagcagctgctgaagcaggtgggctcggctgctacaggagtgacgcaggccctc
aacgacctgctgcagcacatcaagcagtacaccaccggcgggcagcccatcgggcgctac
gaccaggccaccgacaccatcctcaacgtcacagagaacatcttcagctctatgggggat
gcaggtgagatggtgcggcaggctcgcatcctggcccaggccacctcggacctggtcaat
gccataaaagccgatgctgaaggcgagtctgacctggaaaactcccgcaagctgctctct
gcagccaaactgctcgccgatgcaacagctaagatggtagaagctgccaagggagcagct
gccaacccagacagcgaggagcagcagcagaagctgcgggaggcagccgaggggctgagg
attgccaccaatgcggcggcccagaatgccatcaagaagaaactggtcaacaagctggag
aatgcagctaaactggctgctgccgcagccacccagaccattgccgctgctcagcaggct
gcctccaccaataagaacccagcagcacagcagcaacttgtccagagctgcaaggttgtg
gcggatcaaatccccattctggtccagggtgtgcgaggaagccagtcccagcctgatagc
ccaagcgctcagctagctctcatcagcgctggacaaaactttcttcagcctggagctaag
atggtcactgctgccaaggccactgctcctaccatcagtgaccaggcctctgccatgcag
ctgagccagtgtgccaaaaacctagcaactgctttggctgagctcagaactgctgcacag
aaggcacaggaagcctgcggcccactggaaatagacaatgctctgaatgtagtccggaac
ctggagaaggacatgcaggaagcaaaggcctcggctgtggaagggaaactgaaacccctg
cctggagaaacgttggagaagtcctctcaggacctgggaaacagcaccaaggctgtgagc
tctgccattgctcagctgctcagtgaaatttcccagggcaacgagaattacacaggaatg
gctgcccgagacctggctcaagccctgaaagctctgggcatggcagctcgcggtgttgct
gccagcacctcagacccacaggcccgcaatgcaatgctggattgcgccagcgatgtcatg
gataaatcaggcaacttgatagaggagacaaagagggcagtggccaagccaggagaccca
gacagccagcagagactggcacaggttgcgaaggcagtttcccaggccctgaacaggtgt
gtgaactgcctgcctgggcagagagatgtggacaatgccatcaggacagtgggagaagcc
agtaagaaactccttgcagactcattccccccaagctctaagagcttccaggaagcccag
ggcaatctgaaccaggcagccgtagggctgaaccagtctgccaatgagctggtgcagtct
tcccggggcaccactcaggacctctccagggcctctggcaagttcggacaggacttcaat
gagttcttacaggccggcgtggagatggcaggacagtcccagtcgaaggaagatcagact
caggtggtcacaaacctcaagaccatctccatgtcttctagcaagctcctgcttgcagct
aaagctctgtctgcagaccccagcgcccccaacctcaagaaccagcttgcagctgctgca
cgcgctgtcacggacagtattaatcagctgatcacaatgtgcacccagcaggccccaggc
cagaaagagtgcgacaatgccctgcgggagcttgagactgtccgtggcatgctggaaaac
cccacagaagctgtgaatgacctctcctacttcgactgtattgacagtgtaatggagaac
tccaaggttcttggagaggccatggcaggaatctctcacaatgcgaagaacagtaagctg
cctgagtttggaaactctatcagttcagcttccaaagctctgtgtgggctcactgaagct
gctgctcaggcttcctacctggtcggcgtttcggatcccaacagccatgctggccagagg
ggactggtggatccttcccagtttgccagagcaaatcaatccattcagatggcctgccag
aacctggtggatccagcatgcacccaatcacaggttctttcagctgctaccattgttgcc
aaacacacttcggcactgtgcaacgcctgccgtctggcttcatctaaaactgcaaaccct
gttgctaagcgacagttcgtccagtcggcaaaggaagtggctaacaacacagctaatctt
gttaaggcaatcaaagcacttgatggagctttcagtggagaaaaccgcgagaagtgcaga
ggcgcgactgtgcctctgattgaggctgtcgacaatctgactgccttcgcttccaaccca
gagtttgccagcgttccagcacagatcagccccgaggggctccaagcaatgaagcccata
gttgttgctgccaagaccatgctggagagctcaactgggttgatccagactgcccgctca
ctggctgtcaaccccaaagacccaccaaagtggtcggtcctggctggacactccaggaca
gtctccgactccatcaaaaacctcataacaaacatgagagataaagctcctggacagatt
gagtgtgatgaagccattgaggttctcaataggtgcatcagagatgtggatcaggcatca
ttagctgctgttagccagcaacttaacccaagagaagacatttcacaggaggcccttcat
gaccaggtggcagcggcagtgcaggagatcagcatcctgattgaacccatcgctgtggcg
gcccgatctgaggcgtccgagttaggacataaggtgtctcagatggcaagctactttgag
cctcttgtcatggcgtctattggaacagcctcgaagatcgtggacagccagcaacaaatg
aacctgctggatcagaccaagacgctggcagagtctgcccttcagatgctttacactgcc
aaagaggcagggggaaatcctaaagcggcccacacacaggaggcagtggatgagtctgtg
ctaatgatgaaggaggctgtggatgacctgtcagccaccctggcagaggcagccagtgct
tctggagctgtgggaggcatggtggactccatcacccaggccattaacaagattgatgaa
ggcccagacggtgaaccagagggcacttttgtggactaccagaccaccatggtgaagacc
gccaaagccattgccgtcactgtacaggaaatggttacaaaatccaacaccaatccagat
gagctgggctctttggctaatcagctcacaagtgagtttgggcagctggctcacgaggcg
aaacctgctgctattactgcagagaacgaagagattggatcccacattaagaaccgggtg
caggagctgggtcacgggtgtgccaccctggttaccaaggccgggggtctgcagtgcagc
cctaacgatgcctttaccaagaaggagctcattgagtctgcacgcaaggtctccgaaaag
gtgtctcatgtactggcagctctgcaggctggtaaccgtggtacccaagcctgcatcacc
gctggcagcgcggtgtctggcatcatcgctgacctggataccacaatcatgttcgcaaca
gctggcaccctcaaccgagagaacgccgagacattcgctgatcacagggagaacatcttg
aagactgccaaagctctggtggaagacactaagctgttggtatcgggggctgggtcaagc
caggagaggctggcccaggcggctcagtcatcagtcaacacaatcaccaagctggctgag
gtagtgaagctgggagcagctagcttgggagctgaggatccagagacacaggtcgtcctg
atcaacgcagtgaaggatgtggccaaggcgcttggagatctcatcagtgccacgaaggga
gcctcagggaagcctcatgatgatcctgccatgtttcagctcaagaactctgccaaggtg
atggtgaccaatgtgacttcgctcttgaagactgtcaaggctgtggaagatgaagcaacc
aaaggaaccagagccctggaggccaccattgagcacattaagcaggagctggctgtattc
aacagcaaagagccaccacctaagactgcgacacctgaagattttatccgcacaaccaaa
ggcatcaccatggcgactgcaaaggcagtggctgctgggaattcgtgccgtcaggaagac
gtcatcgctacggctaacctgagtcgcaaagccattgctgagatgctgaactcctgcaag
caagcggcgtatcaccctgcggtgaataaagatgtgcaaaccagagcgctccgatatgga
aaagagtgtgccgtcgggtacctgggactgctggagcacgtgctggtgattattcagaag
ccgtcccatgacctgaaacagcagctggcctcctactccaagcgagtggccggctctgtc
acagagctcatccaggcagcagaggccatgaaaggcacagaatgggttgatcctgaagac
ccgaccgttattgctgagaatgaacttctgggagctgctgctgctattgaggctgcagcc
aagaaattggagcagctcaaacctcgagctaagcccaaggaagcagacgagagcctgaac
tttgaggaacagattttggaagctgctaaatccatcgccgcggcaaccagtgctttggtg
aaagctgcctctgcagctcagagagagctggtggcacaaggaaaagtgggcgctagtcca
gccaatgctgtggatgatgggcagtggtctcagggtcttatttcagctgcccgaatggtt
gctgcagctaccagcaacctttgcgaggcagctaactcggctgtgcagggccacgctagc
gaggaaaaactcatctcatctgccaagcaggtggcagcgtccacagctcagctcctggtg
gcctgtaaggtgaaggcagaccaggactcccagaccatgaagaggcttcaggctgctggt
aatgctgtaaagagagcttctgataacctggtgaaggcggcacagaaagcagcattcgat
gcacacgacgatgaagctgtggtggtgaagagcaagatggtcggcggaattgctcagatt
attgcagcccaggaagagatgctgcggaaggagagggagctagaggaagctcggaagaag
ctggcaacgatcaggcaacagcagtacaagttcctgcccactgagcttcgggaggatgaa
caaaactaa
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integrated database retrieval system
