Polyodon spathula (Mississippi paddlefish): 121316682
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Entry
121316682 CDS
T07273
Name
(RefSeq) endothelial PAS domain-containing protein 1-like isoform X1
KO
K09095
hypoxia-inducible factor 2 alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121316682
04131 Membrane trafficking [BR:
pspa04131
]
121316682
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121316682
Membrane trafficking [BR:
pspa04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
121316682
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
FtsK_gamma
Motif
Other DBs
NCBI-GeneID:
121316682
NCBI-ProteinID:
XP_041107673
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All DBs
Position
6:2303822..2353901
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AA seq
879 aa
AA seq
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MNCTCFYICWYNTSNTWNSFESRRAVLTGVDVARGSSSERRKEKSRDAARCRRSKETEVF
YELSHQLPLPHSVSSHLDKASIMRLAISFLRTRKLVNSTWPGNESKSDKQMDGLYLKALE
GFIAVVTQDGDMIFISENINKIMGLTQVELTGHSIFDFTHPCDHEEMRENLSLRNGLGKK
IKDLNTERDFFMRMKCTVTNRGRTVNLKSASWKVLHCTGQVKVYNSCPPHTLCGFKEPPL
TCVVMICEPIPHPSNIDMPLDSKTFLSRHTMDLKFTYCDERITELMGYCPEELLGRSVYE
FYHALDSDSMTKSHQNLCTKGQAVSSQYRMLAKHGGYVWLETQGTVIYNTRNSQPQCIVC
VNFVLSDIEENSVIFSLDQTESLLKPHVLSMNSFFNSGVPASDSSEQLFTRLKEEPEELA
QLAPTPGDTIVSLDFGGPPFEEAPLYKAVMPPPNKPWAVEERNPCSQPEGKSLAALSVLQ
GSPARTPLSASSTSSCSTPSSPGDYYSSIDNDLKVELTEKLFAMETAAKAQCTTELELND
LDLETLAPYIPMDGEDFQLNPIYQEEPPLSEYSANSSSHHSFSTLASLFQPLALPLHSHV
QSENFCTPIQLSAEKKNPSPAAPGPHTPLHYTGTALVPPYHTPTNTPLSSMAGRQNVQRP
SDPLFNYQPNKWSMMDQLPGCQSHSISFYKQRSRDTFFQQDKEVTPARNAVASHYKRKRQ
TEYREQPLFQQLLMENPSQSKPSEMMCKRMKALKADSCSFMEKKSLSMSALQDKFNTGHA
RLEQAINQLQQEKPQCSRNDDENQRVTFSRQVYGLNCQEFNMLPAPKMEGMASRLLGPSF
ETCSLPELTRYDCEVNVPVLSNLNLLQGGDLLRALDQAS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtacctgcttttacatatgctggtataatacttccaacacctggaatagcttt
gaatcccgaagggctgtactgacaggagtagatgttgccagggggagcagctcggagagg
aggaaggagaagtccagagatgccgctcgatgtcgcagaagcaaggagactgaggttttc
tatgagctctcccaccagctccccctgccccacagcgtgagctcacacctggacaaggcc
tccatcatgcgcctggccatcagcttcctgagaactcgcaagcttgtgaactccacttgg
ccaggcaatgaaagcaagagcgacaagcagatggacggcctgtacctgaaggctctggag
ggatttattgccgtggtgacacaggatggggacatgatcttcatttctgagaacatcaac
aaaatcatgggcctgacgcaggtggagctcactggccacagcatcttcgacttcacccat
ccatgcgatcacgaggaaatgagagaaaacctgagcttgagaaacggcctaggcaagaag
attaaagacttaaacacagagcgtgacttcttcatgagaatgaagtgcaccgttacaaac
agaggccggactgtcaacctaaaatcagccagctggaaggtcctgcactgcactggacaa
gtcaaagtctacaacagctgccctccccacacgctgtgtgggtttaaagagccccctctg
acctgtgtggtcatgatttgtgagcccatccctcacccctccaacatcgacatgcctctg
gacagcaagacgttcttgagtcgccacaccatggacttgaagttcacctactgcgacgag
agaatcacagagctgatggggtactgccccgaggagcttttgggacgctctgtgtatgag
ttctaccatgcactggactcagatagcatgaccaagagccaccagaacttgtgcaccaag
ggtcaggcagtgagcagtcagtaccggatgcttgcaaagcacggggggtacgtttggctg
gagacccagggcactgtcatctacaacacccgcaactcccagccgcagtgcatcgtgtgt
gttaacttcgtgctgagcgacatcgaggagaactctgtgatcttctccttggaccagacc
gagtcgctgctcaagccacacgtcctgagcatgaacagcttcttcaacagcggggtgcca
gcatccgactccagcgagcagctcttcaccaggctgaaggaggagcccgaggagctggca
cagctggcacccacgcccggcgacaccatcgtctccctggacttcggagggcctccattt
gaggaagctcccctgtataaggccgtcatgcctcccccaaacaagccctgggccgtggag
gagaggaatccgtgcagccagcccgaagggaagagcctggccgccttgtctgtgctgcag
ggctccccggccaggacccccctgagtgccagcagcaccagcagctgctctacgccaagc
agtcctggagactattacagctcaatcgacaatgatctcaaggttgagctgactgagaag
ctctttgcaatggagactgcagcgaaggcccagtgcactactgagctggagcttaacgac
ctggacctggagaccctggctccatacattcccatggatggagaagacttccagctgaac
cccatataccaggaggagccacccctgtctgaatacagtgccaacagcagctcccaccac
agcttcagcaccctcgccagcctgttccagccactagccttgcccctgcacagccacgtg
cagtctgagaacttctgcactcccattcagctgtctgcggagaagaagaaccccagccct
gctgccccaggcccccacacacccctgcactacacgggcaccgccttggtgcccccctac
cacacccccaccaacactccactgtcttccatggcgggcagacagaatgttcagcggcca
tctgaccctctgtttaattaccaacccaacaagtggagcatgatggaccagcttccaggg
tgccagtcccattcgatatctttttataagcaaaggtcccgggatacctttttccaacaa
gacaaagaagtgacaccagccaggaatgctgtcgccagccattacaagcgcaagagacag
acggagtacagagaacaaccactgtttcagcagcttctcatggagaacccatcccaaagc
aagccctctgagatgatgtgtaaaagaatgaaagccctgaaagcggacagctgctccttc
atggagaagaaatcactcagcatgagtgctcttcaagacaagttcaacactggacatgca
cgtctggaacaggctatcaatcagcttcagcaggagaagccacagtgctctagaaacgat
gatgaaaatcaaagagtgacattttcacgacaggtctacggcctcaactgtcaggagttc
aacatgctgcctgccccaaaaatggagggaatggcaagtcgcctgctgggcccatcattt
gagacctgttccctgccggaattgaccagatatgactgtgaggttaatgttccagtcctc
agcaacctgaacctgctgcaaggaggagacttgctgcgtgcactcgaccaagccagctaa
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