Polyodon spathula (Mississippi paddlefish): 121316822
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Entry
121316822 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121316822
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121316822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pspa04050
]
121316822
04090 CD molecules [BR:
pspa04090
]
121316822
Cytokine receptors [BR:
pspa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121316822
CD molecules [BR:
pspa04090
]
Proteins
121316822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
bDLD3
DUF3377
Copper-fist
DUF7365
DUF4381
Motif
Other DBs
NCBI-GeneID:
121316822
NCBI-ProteinID:
XP_041107984
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All DBs
Position
1:28515214..28519671
Genome browser
AA seq
423 aa
AA seq
DB search
MASACNYRWIFLVMLFLVVSNKPQRSFAQSETYSINVEGKEINCKKCPPGHRVAKDCGLD
SDTDCTSCEDGTYMDFPTDLRKCLTCRKPCGLHEKETAPCIPTVNRECMCKDNAYQLDEE
CVPHRQCPLGQGVYKAGTNMSNVLCRRCIRGYFSDVISSTATCKRHTNCIGNHLSIREFG
NGTADNVCGPKPVKSLLQPGQEHSTDSTDRNSNASGCLQECAHSSVCVNTQTMSIIAVVL
ALLLTLCVTGWSMYIRKRKKLKKHVADLTQVDKHWKFMNRETGTKRNALHVVAGMIGKDW
TKLLGELGYTKDWRTIRDENKHVYDQALEGLRMWTQWEEKSSLVLLKQAAKSIDRNDIYE
ALDSLTDETTKMADKEKKDPTTVLPCIRERKLSFGVTSKIGHQHLKKPLLQSNPIAGEIN
EDR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggcctgtaattataggtggatctttctcgttatgcttttcctggtagtaagc
aataagcctcagagaagttttgctcaatccgaaacatattcaattaacgtagaaggtaaa
gaaatcaactgcaaaaaatgtccacctggtcacagagttgcgaaagactgcgggctggac
agtgatactgactgcaccagttgtgaagatggtacatatatggattttccaacagacttg
cggaagtgcttaacctgcaggaaaccctgcgggcttcatgaaaaagaaactgccccatgc
attccgactgtgaaccgggagtgcatgtgtaaagataatgcctatcagttggacgaagag
tgtgtgccacacagacagtgtccacttggacaaggagtttacaaagcaggcacaaacatg
tccaatgtactctgcaggcgctgcatacgtggttatttctcagatgtaatttcaagcacc
gcaacttgtaaacggcacacaaactgcattggaaatcatttgtcaattagggaatttgga
aatgggacagctgacaacgtttgtggaccaaaaccggttaaatcattacttcagcctggg
caggaacattctacagattctactgatagaaacagtaatgcatcaggatgccttcaagag
tgtgcacacagcagtgtgtgtgtgaacacacaaacaatgtccatcatagcagtggtgctg
gctttactgttaacactctgtgtgactggttggagcatgtatataaggaagagaaagaaa
ctaaagaagcatgttgcagatttaacacaggttgataaacactggaaatttatgaacaga
gagacaggtacaaagagaaatgcgttgcatgttgtagcaggtatgattggcaaagactgg
acaaagctgcttggagaacttggctatacaaaggactggcggactatacgagatgaaaat
aagcatgtgtatgaccaggcgctggaggggctgaggatgtggacacaatgggaagaaaag
tcatcgctggtgctcttaaaacaagcagcaaagtcaatcgatagaaatgacatctacgaa
gcactggattcacttacagatgaaacaacaaaaatggctgataaggaaaaaaaagatcca
actactgttcttccttgcataagggaaagaaaattatcatttggtgtgacaagcaaaatc
ggtcaccagcatttgaagaagcctctgctacaatcaaatcccattgcaggagaaataaat
gaagatcgataa
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