Polyodon spathula (Mississippi paddlefish): 121317627
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Entry
121317627 CDS
T07273
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121317627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121317627
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317627
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19-related factors
121317627
Complex C
121317627
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121317627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
121317627
NCBI-ProteinID:
XP_041109699
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All DBs
Position
6:complement(74776621..74787330)
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AA seq
722 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIALWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNIAGCRLVFERWMEWQPE
EQAWHSYINFELRYKEVEKARAIYERFVIVHPDVKNWIKYARFEEKHGYIAHGRRVFERA
VEFYGEDIMDEQLYVAFAKFEEKQKEFERVRVIYKYALDRIPKQQAQELFKTYTVFEKRF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDPVRDVYERAIANVP
PIQEKRHWRRYIYLWINYALYEELEARDPERTRQVYQACLELIPHKKFTFAKMWLLYGQF
EIRQKNLPFARKSLGTGIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFGPENCST
WIKFAELETILGDMDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYEKTRELYRRL
LQRTQHVKVWISYAQFELSLESEARLAKCQQIYEEANKAMRNCEEKEERLMLLESWRDLE
AEFGTDVTRERVRKLLPQKVKKRRKLQAEDGSDAGWEEYYDYIFPEDSANQPNLKLLAMA
KMWKKQKQQEEEPEEPDESEDSKDSEDSESEKVEVPEHQEEQETAEAPTEQDTDSDEKKS
AS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggcggctggaaaacaaaggatacctaaagtagccaaggtgaaaaacaaa
gctcccgccgaggtgcagatcacagcggagcagctgctgagagaagctaaagagagagag
cttgagcttctccccccaccgccaaagcagaagatcacagacgaagaagagctgaacgac
tacaaactaaagaaaagaaaaggatttgaggataacatccgaaaaaacagaacagttatc
agcaactggataaagtatgcacaatgggaggagagcttaaaggaagtacagcgagcacgt
tccatatacgagcgtgctctcgatgtggatcacaggaacatcgcgctgtggctgaagtat
gccgagatggagatgaagaaccggcaggtgaaccatgctcgaaatatctgggacagagcc
atcaccatcctcccccgggtcaaccagttctggtacaagtacacgtacatggaggagatg
ctggggaatattgctggctgtcgactggtgtttgagcgctggatggaatggcagccggag
gagcaagcgtggcattcctacatcaattttgaactgcgctataaagaggtggaaaaagca
cgcgccatttacgagagatttgttatagtccacccagatgtaaagaactggattaagtat
gcccggtttgaagaaaaacatggctacattgcccatggcaggagggtgtttgagagggca
gtggagttctatggagaggacatcatggatgaacagctctatgtggcctttgcaaagttt
gaagagaaacagaaagagttcgaaagggtgagagtgatctacaaatacgctttagacagg
atcccaaaacagcaagcccaggagctcttcaaaacctacactgtcttcgagaagcggttt
ggagatagacgaggaattgaagatgtcatcgtcagcaagaggcgctttcagtatgaagaa
gaagtgaaggctaaccctcacaactatgatgcatggtttgactacttgaggctagtggaa
agtgacgcagatccagaccctgttcgggacgtgtatgagagggccattgcaaatgtgcca
cctatccaagaaaagaggcactggaggagatacatttacctctggattaactatgcatta
tatgaagaattggaagccagggatccagagaggacaagacaggtgtaccaagcgtgtctg
gaactcattccacacaaaaagtttacttttgctaaaatgtggttattatacggacagttt
gaaatcagacagaagaacctcccttttgccaggaagagtttgggcacaggtattggcaaa
tgtccaaagaacaaactttttaaagggtacattgaactggagctgcagttgagagagttt
gaccgctgcaggaagctgtatgaaaaatacctggaatttggccctgagaactgtagcact
tggattaaatttgctgaactggagaccatcttgggagatatggatcgagcacgtgcaata
tatgaactggcaataggtcagcccaggctagacatgccagaggtactttggaaatcatac
attgattttgaaattgaacaagaagaatatgagaagacaagagagctttataggaggttg
cttcagcgcactcaacatgtgaaggtatggatcagctatgcacagtttgagctgtctttg
gagagcgaggctcgtctggccaaatgccagcagatctacgaggaggccaacaaggccatg
cggaattgtgaagagaaggaggagagactcatgttactggagtcctggagggacttggag
gctgagttcggcacagacgtcacacgggagagagtgcgcaaactccttccccagaaagtc
aagaaaaggagaaagctccaggccgaagatgggtcggatgctggctgggaggagtactac
gattacatctttccagaggattctgccaaccaacccaaccttaaactgcttgctatggca
aaaatgtggaagaaacaaaaacagcaggaggaagaacctgaggaaccagacgagtctgaa
gattccaaagattctgaagattcagagtcagaaaaggtggaagtgccagaacatcaggaa
gagcaggagacggcagaagccccaactgagcaggacactgatagtgatgaaaagaaaagt
gcatcttaa
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