KEGG   Polyodon spathula (Mississippi paddlefish): 121320140
Entry
121320140         CDS       T07273                                 
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121320140 (apex1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121320140 (apex1)
Enzymes [BR:pspa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     121320140 (apex1)
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     121320140 (apex1)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-GeneID: 121320140
NCBI-ProteinID: XP_041114337
LinkDB
Position
8:51451681..51464358
AA seq 316 aa
MSKRAKKDARVEDAEPDNGAGSEAKRSKKAGGKAVKEPEAPVLYEDSPDKLSTPDGRAAN
LKISSWNVDGLRAWVKKNGLDWVREEDPDIICLQETKCSEKALPADITDMPEYPHKYWAA
SDEKEGYSGVAMLCKTKPINVTFGIGKEEHDKEGRVITAEFPSYFLVTAYVPNAGRGLVR
LDYRKGWDVDFRAYLTELDQRKPLILCGDLNVAHQELDLKNPKTNRKSPGFTPEERQGFS
ALLAAGFVDSFRHLYPERPGAFTFWTYMMNSRSKNVGWRLDYYVLSQALLQNLCDSKIRS
KVMGSDHCPITLHMTL
NT seq 951 nt   +upstreamnt  +downstreamnt
atgtcgaaaagagccaagaaggacgcgagagtggaggatgcagagccagataacggagca
ggctcagaggctaagcgcagtaagaaggcaggagggaaagcagtcaaggagccggaagcc
ccagtgctgtacgaggactctccagataaactgagcaccccagacggccgagccgccaat
ctgaaaatcagctcctggaatgtggatgggctgcgcgcctgggtcaagaagaacggtctc
gactgggtgagggaggaggaccccgatatcatctgcctccaggaaacaaagtgttctgag
aaagctctgcctgctgatatcacagacatgcctgaatacccacacaagtactgggctgct
tctgacgagaaggagggctacagtggggtggccatgctctgcaagaccaagcccatcaac
gtgaccttcggaattggcaaggaggagcacgataaggaaggccgggtcatcacggcagag
ttcccttcctacttcctggtgacggcctacgttcccaacgctggccgcggcctggtccgg
ctggactaccgcaagggctgggatgtggatttccgagcctacctcaccgagttagaccag
cgcaagcccctcatcctgtgcggggatctcaatgtagcccaccaggagctcgacctgaag
aatcccaaaaccaaccgtaagagccccggcttcacccccgaagagcggcagggcttcagc
gctctgctggccgcgggcttcgtggacagctttcgccatctctacccagagcgcccaggt
gccttcaccttctggacctacatgatgaactcacgcagcaagaatgtgggctggaggctt
gactactacgtgctgtcccaggccctgctgcagaacctctgtgacagcaagatcaggtcc
aaggtcatgggcagcgaccactgccccatcacactgcacatgaccctgtga

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