Polyodon spathula (Mississippi paddlefish): 121322821
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Entry
121322821 CDS
T07273
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B-like isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121322821
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121322821
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
121322821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Arm-DNA-bind_1
Motif
Other DBs
NCBI-GeneID:
121322821
NCBI-ProteinID:
XP_041119096
LinkDB
All DBs
Position
11:33897615..33907832
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AA seq
470 aa
AA seq
DB search
MMERHINCKKYEFNSEELDEIASKISNLDKWREIFSSQGLELNNASVKKHQESRKSEDES
ENGAGATSGTKPRGQAATFNVLYSIPKPLTISSSLGGIPITMDMAGDLRKILFGSTFHIF
NYEWKKSYFKFREPFSDLSYALEAERGGSSAIQMAVQANIIRYLLFTGNNGTENICLQDL
YEVSPKKQEEALAAALSDILWSAGESHSGLVCLVSTDSYFTPSTEYKVDNFTERVQLFKF
SEKETMQKFIYEHIQCFKEEGSHGVILFLYSLIFSRTIDRLREDLDSTTSHLLHSSLGNF
VCQQALLNLMLTGRASPNVFNGNIQYDDQGSPLPLPLHGVLIRSDVGYLHWNREMLQHGK
LPMVGSMLKTPKLPIWLCNINGTYSVLFSTNRSLLSDWKMEHLFDLYLYNGQLAQNHTVI
LTIDTHSHHWEEGHSKGEGDLEKRFPSVEMTIRTKWEGAAIDWNGTVPFF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcggcatattaactgcaaaaagtatgaattcaacagtgaggaattggatgag
attgcaagcaaaatatctaacctggacaaatggagggaaatctttagctctcaggggttg
gaattaaataatgcttcagttaagaaacaccaggaaagccgcaagtcagaggatgagagt
gaaaatggagctggagccacttctggcaccaagcctcgtggacaagctgctacctttaat
gtcctttattctattcccaaaccccttaccatctcttctagtttgggcggaattcctatc
acaatggatatggcaggggaccttagaaagattttgtttgggagcaccttccacatcttc
aactacgaatggaagaaatcctacttcaagtttcgggagcctttctctgacttgtcatat
gccctggaagcagaaaggggaggatccagtgcaatccagatggctgtgcaggcgaacatt
atcagatacctactcttcacaggaaacaacggaacagaaaacatctgcttacaagatttg
tatgaagtcagtccgaaaaaacaagaagaggccctggcagccgccctgtccgatattctg
tggtcagctggcgagtcacatagtgggttagtctgtcttgtgtctacagactcttacttt
acaccaagcactgagtacaaagtggacaacttcacagagagggttcagctgtttaaattc
agtgaaaaagaaaccatgcagaaattcatctatgaacatatacaatgttttaaagaagaa
ggaagccatggagtgattctgttcctgtacagtctgattttctcaaggactattgacagg
ctaagagaagaccttgactctactacatcccacctcttgcactcaagtctggggaatttt
gtttgccagcaggctttgttgaacctgatgttgacgggcagggccagccccaatgtcttc
aatggcaacattcagtatgatgaccaaggcagtcccctgccgctccccctgcacggagtc
cttatccgtagtgatgtggggtacttacactggaaccgggagatgctgcaacatggcaaa
ctcccaatggtgggaagcatgttgaaaacccctaaactgccaatctggctgtgcaacatc
aatggaacatacagcgtgctgttcagtacaaaccgctcactcctgtccgactggaaaatg
gaacacctgttcgacctgtacttgtacaatggacagctggcacaaaaccatacggttatt
cttaccatagacactcactctcatcactgggaagaggggcatagtaaaggcgagggggat
ctggagaaacggttcccttctgtggagatgacaataaggactaaatgggaaggagcagcc
attgactggaatggaacggttccatttttctaa
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