Polyodon spathula (Mississippi paddlefish): 121326604
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Entry
121326604 CDS
T07273
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121326604 (smc4)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121326604 (smc4)
Condensin II
121326604 (smc4)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ATG17_like
Motif
Other DBs
NCBI-GeneID:
121326604
NCBI-ProteinID:
XP_041125868
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Position
14:complement(35491977..35513463)
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AA seq
1248 aa
AA seq
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MLSCLLFSLDSVMPSKTAKSSTASKPKGKGVQPLDDSSDEVEIPPHKINANGKEAAQSTN
ATPNVKDESVDNRSLEEILNSIPPPPPPAMTNEPGAPRLMITHIVNQNFKSYADEQVLGP
FHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHSDVQSCTVEVH
FQKIIDKEGDDYEVIPNSKFYVSRTAYKDNSSVYNINGKKATFKDVGALLRSHGIDLDHN
RFLILQGEVEQIAMMKPKGQTDHDEGMLEYLEDIIGSARLKEPIQVLCRRVESLNEQRGE
KLNRVKMVEKEKDALEGEKNCAIEFLTMENEIFKKRNHVCQYYIHDLQRRVTDMEAQKQA
ILDETKDINEKSRNLSEQLKVKNKALKDVEKKLGKITKFIEERKEKFTQLDLQDVEVREK
LKHSKSKVKKLQKQLQKDKDKEEELKNVPANSEKTISEATAKKEEQEKQKAVEEEKLKKV
MESLKLETRGLQQEKEVKEKELMELSKAVNATRSTMDVAQSEIDIYLSRHNTALTQLNNA
KEALQTTTETLKERKTAIKELETKIPKCEEELQKDEQQLIKIVKADGEIREVVRGLRQKV
EDAKSSLSSNRSRGKVLDALMQQKKSGKIPGILGRLGDLGAIDEKYDVAISSSCGSLDNI
LVDTIDTAQECVNFLKKQNVGVATFIGLDKMKVWENKMAKIQTPENIPRLFDMVKVQDEA
ILPAFYFALRNTLVADHLEQATRLAFQKDKRWRVVTLQGQIIEQSGTMTGGGGRVMKGRM
GSSLAQEVSQEELDAMESKLKKDVVLAQTYQEDKGKLEEKVHTMQQTIREMKNTLEKYIA
SIKSLSEQEVHLMVQMKELQANVVAAAPDKNKQKQLEKTLETFKKEYESAAGKAGRVEAE
VKRLHNLIIEINNHKLKSQQDNLDKINKEIDDCASAITKAQVAIKTAGRNLKKAEDAVTR
TEQEIVENDNTVEELTGELKKLEEEATVVMKECKEAEETLPEVQEEHRAVLQEIKAIQED
DHALQKESLNIRLKIEQIESHIAEHQSKIKHWQKEEELYLQRVAELDEITSERDNFRRAY
EDLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKS
WKKIFNLSGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNA
QFIIISLRNNMFEIADRLIGIYKTHNTTKSVGINPKIIASKELAEVSS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgcttgcttttttctctagattcagtcatgccttctaaaacggctaaaagc
tcaactgcatcgaagccaaagggaaaaggagttcaacctctggatgattcctcagatgag
gtggaaatacccccccacaaaatcaacgcaaatgggaaagaagcagcacagagtacaaat
gctactccaaatgtgaaagacgaatctgttgataatcgaagtttagaggagattttgaat
agcatccctcctcccccaccaccagcaatgaccaatgaacctggtgcacctcgtctgatg
ataactcatattgtaaaccagaacttcaaatcatatgcagatgaacaggttttggggccc
tttcacaagcgcttttcctgcattattggaccaaatggcagtgggaaatccaacgtgata
gactcaatgctttttgtctttggatacagggcccaaaagataagatccaaaaaactctct
gtcctgatacacaattctgatgagcacagtgatgtacagagctgtactgtggaagttcac
tttcaaaaaatcattgacaaggaaggtgatgattatgaagtcatccccaacagcaaattt
tatgtttcaagaacagcctacaaagacaattcatcagtatacaacatcaacggaaagaaa
gcaaccttcaaagatgttggagctttgcttcgtagtcatggaatagacctggaccataac
aggtttttgattttacagggtgaagtggaacaaattgccatgatgaaaccaaaaggccaa
actgaccatgatgaagggatgttggaataccttgaggatatcataggatctgcaagactt
aaagagcccattcaggtcctttgtcgcagagttgaatcgctaaatgaacagagaggagaa
aagttaaacagggttaagatggtggaaaaagaaaaagatgcactggaaggagagaagaat
tgtgcaattgaatttcttactatggagaatgagatcttcaaaaaaaggaaccatgtttgt
cagtattacatccatgatctgcagaggagagtgaccgatatggaagcacaaaagcaagca
atccttgatgaaactaaagacatcaacgaaaaaagtagaaacctttctgaacagttgaaa
gtaaagaacaaggctttaaaagatgttgaaaagaaattgggtaaaatcacaaagtttatt
gaggaaagaaaggagaaattcactcagctggacttgcaagatgttgaagtcagagaaaag
ttgaagcattccaaaagcaaagtaaagaagctccaaaagcaactgcaaaaggataaagac
aaggaagaagaactgaagaatgttcctgccaacagtgaaaaaactatttccgaagcaact
gcaaaaaaagaagagcaggagaagcaaaaggcagttgaagaagaaaaattaaagaaagtt
atggaaagcctgaagctggaaactcggggactacagcaagaaaaggaggtgaaggagaag
gagctaatggaactgagtaaagcagtaaatgcaactcgttccacgatggatgttgcccaa
tcggaaattgatatatatctcagtcgccataatactgcactaacccaacttaacaacgca
aaagaggccttacaaactacaactgagactcttaaggaaagaaaaacagctattaaagag
ttggagacaaaaatacccaaatgtgaggaagaactacaaaaggatgaacaacaactcata
aaaatagtaaaagctgatggggaaataagagaagttgttagaggacttcgccagaaggtg
gaagatgcaaagagttccctttcatcaaaccgtagtcggggaaaagtgctggatgcacta
atgcaacaaaagaagtctggaaaaataccaggaatccttgggagattgggagaccttgga
gcaattgatgaaaagtatgatgtggccatttcctccagctgtggatctctggacaacata
cttgtagataccattgatacagctcaagagtgtgttaatttccttaagaaacaaaatgtc
ggtgttgcaactttcattgggctggataagatgaaagtttgggaaaataaaatggcaaag
attcagactcctgagaatattccaaggctatttgatatggtgaaggttcaagatgaggcc
attcttccagctttttattttgctttgcgtaatactcttgtggcagaccatctagaacag
gctactcgattagccttccagaaagacaagcgttggagagtggtgacactgcaaggacag
atcatagaacagtctggcacaatgactggtggtggtggaagggtcatgaaaggaagaatg
ggatcttctttggcccaggaagtttctcaggaagagttagacgcaatggaaagtaaactt
aaaaaagatgttgtcttggcacaaacttaccaagaagacaaagggaagcttgaagagaaa
gtgcatacgatgcaacagactatccgggaaatgaaaaacaccttggagaagtatattgct
agcattaagagtctgtctgagcaagaggttcacctcatggtacagatgaaggagcttcag
gcaaatgttgttgcagctgctcctgataagaataaacagaagcaactggaaaagacactg
gagacattcaaaaaagaatatgaaagtgctgctggaaaagctggtagagttgaagcagaa
gtaaaaaggctgcataatctaattatcgaaataaataatcacaaactaaaatctcaacaa
gataacctagataaaattaacaaggaaatcgatgattgtgcttctgcaataactaaagct
caggttgccatcaagactgctggaagaaatcttaagaaagctgaagatgcagttactcgt
acagagcaggaaattgtggagaatgataacactgtggaagagcttacaggcgagctgaaa
aaactggaagaggaggctactgttgtcatgaaggaatgcaaagaagctgaggagacattg
cctgaggtacaggaagaacaccgagctgtgcttcaggagattaaagccattcaagaggat
gatcatgcactccagaaagagtctctgaatatacgactgaagatcgagcaaattgaaagt
catattgcagagcatcagtcaaagattaaacattggcaaaaagaggaggaactatacctg
cagcgtgtggctgaactggatgaaattaccagtgaacgtgacaactttagaagggcttat
gaagatctaagaaagcagaggctgaacgagtttatggctggattcaatgtaatcacaaat
aaacttaaagaaaattaccagatgctcacactaggtggggatgctgagctggaattggta
gacagtctggacccattctcggaaggaataatgtttagtgtaagaccccccaagaaaagt
tggaagaaaatcttcaatctttcaggtggtgagaaaacacttagctctctcgctttggtt
tttgcacttcatcattttaaaccaactcctttgtactttatggatgagattgatgctgca
ctggacttcaaaaatgtttccattgttgcattttacatttacgaacaaacaaagaatgcc
caattcatcattatttctttgcgaaataacatgtttgagattgctgacagacttattggg
atatacaaaactcacaatacaacaaagagcgttggaataaatccaaaaattattgcttca
aaagaacttgcagaagtgtcatcttaa
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