Polyodon spathula (Mississippi paddlefish): 121326736
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Entry
121326736 CDS
T07273
Name
(RefSeq) cohesin subunit SA-1-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121326736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121326736
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121326736
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STAG
SCD
Cnd3
Spo16_C
Motif
Other DBs
NCBI-GeneID:
121326736
NCBI-ProteinID:
XP_041126103
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Position
14:33116954..33151781
Genome browser
AA seq
1259 aa
AA seq
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MITSELPVLQDSTNESGQAEAVAVSVSVSELEDTSEVKGKRKRGRPGRPPSANKKPRKSP
AEKNQLAGSRGGRKANGVPQQNGDSEPVTLFEVVKMGKSAMQAVVDDWIESYKQDRDIAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSN
FCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIVGKRANEKLELLLEKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLVLQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLVEEAVQGEEVLSDRQETALIELMMCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPQ
YFDLDIYSAGRMEKHLDALLKQIKFVVEKQTETDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDELVDRFNHSVEELLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTKWDMFGNCY
RLLKAGVEQGSMPEQIAVQALQCSHYSILWQLVTITEGSPSKDDLIALRKVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLTSGSREGLQPLVFNPDNPLQNELLNFVMDHV
FIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKIQCAKTLILSLQQLFNELIQEQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGPEFPPPNLAFLEVLSEFSSKLLRQ
DKKTVHSYLEKFMSEQMMERREDVWLPLISYRNSLLTGGDEDRLSVTSGSSSKATSVRSK
KGRPPLHKKRIEEESVESSWIMRDTLQTPGALQTPQLTSTVLRENPRQAAEHIPDQDSEP
GSETDYVHNQQMQMSWLGQQKLEDVNRKDRTGMNYMKARSGGVRQTVRGLMEDDAEPIFE
DVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcagagctaccggttttacaggactcaacgaatgagtctgggcaggcggag
gcggttgctgtcagcgtcagtgtgagtgaactggaggacaccagcgaggtcaagggcaag
aggaagagagggcgccctggaaggcctccgtctgccaacaaaaaacctcggaagtcacct
gctgaaaagaaccagttagcaggatctagaggagggagaaaagccaacggggtcccccag
cagaacggagacagtgagcctgtcaccctgtttgaggtggtgaagatgggcaagagtgcc
atgcaggctgtagttgatgactggattgagtcctacaagcaggaccgagacatagcactt
ctggatctgatcaatttctttatccagtgctctgggtgtaaaggcactgtaagaattgag
atgttccgaaacatgcagaatgcagagattatcagaaaaatgacagaagaatttgacgag
gacagcggtgattacccactcactatgccaggtcctcagtggaagaaattcagatcaaac
ttttgtgaatttattggggtgctaattcgacagtgtcagtacagtatcatttatgacgag
tacatgatggacactgttatttccctacttactgggctctcggactcccaggtcagagcc
tttaggcataccagtactctggcagctatgaagcttatgactgcccttgtcaacgtggcc
ttgaatctgagtatccaccaggataacacacagaggcaatacgaggcagagagaaacaaa
attgtaggaaagcgtgcaaatgagaaattggagttgcttttagaaaagcgtaaagagctt
caagaaaatcaggatgagattgaaaatatgatgaactctattttcaagggtattttcgtt
caccgatatagggatgcaattgctgaaatcagagctatttgtatagaggaaattggtgtt
tggatgaagatgtacagtgatgccttccttaatgacagttatcttaaatatgttggttgg
actctgcatgaccggcaaggtgaagtcaggttgaagtgtttgaaagctctgcaaaatctc
tacaccaacagggaactctttccaaaattggaacttttcacaaacaggtttaaggatcga
attgtgtccatgacccttgataaagagtatgatgtagctgtagaagccattcgattggtg
actttagtattacaagggagtgaggatgccctgtccaatgaagactgcgagaatgtgtac
catctggtgtactcggcccatcgccctgtggcagtagcagcgggagagttcctgcatagg
aagttgttcagccgacatgacccccaagcagaggaggccttggccaagagaagagggaga
aatagccctaatggaaatctcattagaatgcttgtactgttcttcttagaaagtgagcta
catgagcatgcagcctatttggtggatagtttatgggaaagctcacaggaactgctaaag
gactgggagtgcatgactgaattactggtggaggaggctgttcaaggagaggaagtattg
tcagacagacaggaaactgcactgatagagctaatgatgtgcaccattcgacaggcagca
gaggctcaccctccagttggcagaggaactggaaagagagtactgactgccaaagaaagg
aaaacacagattgatgacaaaaataagctaactgagcacttcattatggcacttccaatg
ttgctttccaagtatcaagctgattctgagaaggtggcaaatctattacaaatccctcaa
tattttgacctagacatctatagtgcagggaggatggagaagcacctagatgccctgtta
aaacaaatcaagtttgtggtggaaaagcaaacagagacagatgtgttggaagcctgcagt
aaaacgtatagcattctgtgcagtgaggaatacaccatcatgaacagagtggacattgcc
cgcagtcagctcatagacgagctggtggacaggttcaatcattcagtggaggaactgctg
caagagggtgaagaagcagatgatgatgatatttataatgtactttcaactttgaagcga
ctaacggcattccataatgcacacgatcttaccaagtgggatatgtttggaaattgctac
aggttgctgaaggcaggtgttgagcagggatcaatgccagagcaaattgcagtacaggcc
ctgcagtgttctcactactctattctctggcagcttgtcacgattacagaaggatcccca
tccaaggatgatctaattgcactaagaaaagttgtcaagtctttccttgctgtttgccag
caatgcttatcgaatgtcaacactccagttaaagaacaggcctttatgctcctctgtgat
cttctaatgatcttcagccaccagttgacgtcgggaagcagggagggactgcagcctcta
gtgttcaatccagacaatccgctgcagaatgaactcttgaactttgtgatggatcacgtc
ttcatagatcaagatgacgagaaccaaagcatggagggggatgaagaagatgaagctaat
aagatagaagccctacacaagaggagaaacctcctggcagcgttcagcaaactcattatc
tatgatattgttgacatgcatgctgctgctgacatcttcaagcactatatgaagtattac
aacgattatggagatataatcaaggaaacactaagtaaaacaaggcaaactgacaagatc
cagtgtgccaaaactctcattcttagcttgcagcagctctttaatgagcttattcaggaa
caaggacctaatctggacagaacctcctctcatgtcagtggaattaaggagctggctcgc
agatttgcacttacttttggtctggatcagatcaaaacgagagaggctgttgcaaccctg
cacaaggatggtatagagtttgccttcaaatatcaaaacccgaaaggaccagaatttcct
cctccgaatcttgctttccttgaagttctcagtgagttctcttccaaactccttcgtcaa
gacaaaaaaacagtacactcttatctggagaagttcatgtcagagcagatgatggagcgg
cgggaggacgtgtggctgcccctcatctcatacaggaactctcttcttactggtggcgac
gaggacaggttatctgtcaccagcggaagcagcagcaaagccacgtcggtacggagtaaa
aaagggcgacctcctcttcacaagaaacggatagaggaggaaagtgtggaaagctcctgg
atcatgagagacactctccagacccctggagccctgcagacaccacagctcacctccaca
gttctccgagaaaatccccggcaagcagctgaacatataccagaccaagactctgagcca
ggctctgaaacagactatgtacacaatcaacaaatgcagatgtcctggttaggtcaacag
aagttggaggatgtaaaccggaaagacagaacgggcatgaattacatgaaagcaagaagt
ggtggtgtccggcaaactgttcgaggcctcatggaggatgatgcagagccgatcttcgaa
gacgtgatgatgtcatcacgtggccagctggaggacatgaatgaagagtttgaagacacc
atggtcattgatctacctccttcgaggaacagacgggagagggctgaattaagaccagat
ttctttgactctgcagctatcatagaagatgattcaggtttcgggatgcccatgttctga
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