Polyodon spathula (Mississippi paddlefish): 121326915
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Entry
121326915 CDS
T07273
Name
(RefSeq) eukaryotic initiation factor 4A-II-like
KO
K03257
translation initiation factor 4A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121326915
03012 Translation factors [BR:
pspa03012
]
121326915
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121326915
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121326915
mRNA cycle factors
Stress granule specific factors
121326915
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
eIF-4
121326915
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121326915
Exosomal proteins of bladder cancer cells
121326915
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
121326915
NCBI-ProteinID:
XP_041126498
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All DBs
Position
14:complement(30585759..30591571)
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AA seq
409 aa
AA seq
DB search
MSSSSADYNRDGDHAGPEGMEPDGVIESNWNEIVDNFDDMNLKETLLRGIYAYGFEKPSA
IQQRAIMPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQIQ
KVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIK
MFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPADVLEVTKKFMRDPIRILVK
KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDF
TVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYI
HRIGRGGRFGRKGVAINFVTEDDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagttctgcggattataacagagacggagaccatgcgggccctgaaggaatg
gaacccgatggcgtcattgagagcaattggaacgaaattgtggacaattttgatgatatg
aacttaaaggaaacattacttcgcggtatttatgcctatggttttgaaaagccatctgcc
attcaacagagagctatcatgccatgcattaaaggctatgatgtcattgctcaggcacag
tcaggaactggcaagacagccacatttgcaatctctatccttcagcagctggagattgac
cagaaggagactcaggctctggttttggctccaaccagagaactggctcaacagatccag
aaagtaatcctggctctgggtgactacatgggtgccacgtgtcatgcctgcattggaggc
actaatgtccgcaatgagatgcagaagctgcaggcggaggctccccacattgttgttgga
acacctgggcgagtgtttgacatgctgaacaggagatacctgtctcctaagtggataaag
atgtttgtgctggatgaagctgatgaaatgctgagtagagggtttaaggatcaaatatat
gaaatcttccagaagctgagcacaaatattcaggtagtgcttctgtctgctacaatgcct
gctgatgtgttggaggtgactaaaaagtttatgcgtgacccaatccgtattctggtgaaa
aaggaagagcttaccctagagggtatcaagcagttctacataaatgtagagagagaggag
tggaagttggacacactgtgtgacttgtatgagactctgaccatcactcaagctgtcatt
ttcttgaacacaaggaggaaggttgactggctgacggaaaagatgcatgcaagagacttc
actgtctctgctctgcatggtgatatggaccagaaggaaagggatgttatcatgagagaa
tttaggtctggctccagtcgtgtcctgatcacaactgacttgttggctcgtggtattgat
gtgcaacaagtgtctctagttattaactatgatctgcccacaaatcgggagaactacata
cacagaattggtcgtggtggccgttttggcagaaaaggagttgccattaattttgttact
gaagacgacaagagaattcttcgagatattgagacattctacaataccactgttgaggaa
atgcctatgaatgtagctgatctgatctaa
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