Polyodon spathula (Mississippi paddlefish): 121330026
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Entry
121330026 CDS
T07273
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121330026 (slc6a5)
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121330026 (slc6a5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121330026
NCBI-ProteinID:
XP_041132178
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Position
17:1194479..1214205
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AA seq
693 aa
AA seq
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MEPVPHKDTPTNVYSKCVSPHCTEAVLSQSIMKSTVEQNNAAGNWTTMSQTTVVLGTDGN
TSVLPGTINGGDDDDDDKDGDENKVRGNWSNKLDFILSMVGYAVGLGNVWRFPYLAFQNG
GGAFLIPYLIMLALAGVPIFLLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAI
YYNIIMCWTIYYLFSSLGSLPWANCRNPWNTPDCKDKDMLLLDSCILRDKNITSIKNSTF
CMSASVANNLTRLTNVTLENKTFVSPSEEYFKYNVLHISKGIEYPGDIRWPLALCLFLAW
LIVYVSLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGILYFITPKWEKLNDA
KVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNIYRDTLIVSCTNSATSIFAGFVIFSVI
GFMAHELQVPIEKVADEGPGIAFVVYPEALTRLPLSPFWALIFFLMLLTLGLDTMFATIE
TIVTSVSDEFPKYLRKHKPIFTLVCCISFFVLGFPMITENGMYMLQLVDTYAASYSLVII
AIFELVGISYIYGLQRFCEDIEMMIGFQPNRFWRVCWALVTPTILTFILFLSLYQWKVMT
YEDYVYPTWSMVLGWLMVVCSVIWIPIMFVIKMHLAPGSFIERLKLVCSPQPDWGPFLMK
HRGERYKNMTDPLGTNSLGLKLPPKDFELGTQF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgttccgcacaaggatacacctacaaatgtttatagcaaatgtgtgtctccc
cactgcaccgaagcggtactcagtcaaagtattatgaagagcacggtggagcaaaacaat
gccgcaggcaactggacaacgatgagtcagaccaccgtggtattaggcacagatggtaac
acgtctgttctgcctggcaccatcaacgggggtgatgatgatgacgatgacaaagatggg
gatgaaaacaaagtcagaggaaactggtcaaataaactggatttcatcctttctatggtt
ggttacgctgtgggtttgggaaacgtatggcgatttccctacctagcctttcaaaacgga
ggaggtgcgtttttaattccttacctgataatgctggctctcgccggtgtccctatattt
ttattggaggtgtcattgggacaatttgccagccagggacctgtctctgtatggaaagct
attcctgcgctccaaggctgcgggattgccatgttgattatttctgtcctaatagccata
tattacaacatcatcatgtgctggactatctactacctgttttcctcgcttgggtctttg
ccgtgggcgaattgcaggaacccttggaacacaccagactgcaaagacaaagacatgctt
ctgttagattcctgtatactgcgcgataaaaacatcacctctattaaaaacagtaccttt
tgtatgtctgccagtgtcgccaataacctgaccaggctcactaacgtcacattggaaaac
aaaacttttgtcagccctagtgaggagtatttcaaatacaatgtactgcacatctctaaa
ggcattgaatacccaggggacatcaggtggccactagccctgtgcttgtttttggcctgg
ctcattgtctatgtatcgctggctaaaggaataaagtcatcagggaaagtagtatatttt
acagctacgtttccctatgtggtgttggtcattctgttgatcagaggagtcacattgccc
ggggctggagctggaatcctatactttataacaccaaagtgggaaaaactcaacgatgct
aaggtgtggaaggatgctgctactcaaattttcttctccctgtctgcagcctggggtgga
ctaattactctttcatcatacaacaaattccacaataacatttatagggatacgctcata
gtgtcgtgtactaacagcgctaccagcatcttcgcaggatttgtcatcttctcagtcatc
gggttcatggctcatgagcttcaggtgccaattgaaaaagttgctgatgaagggcctggc
attgcctttgtagtttatccagaagcattaaccaggcttccactctctccattctgggct
ctgatattctttttaatgctgttgactcttggattggatacaatgtttgctaccattgag
acgatagtaacatctgtttccgatgagtttcccaaataccttcgtaaacacaagcccatt
ttcacactggtgtgttgtatatcatttttcgtgctgggatttcccatgataacggagaat
ggaatgtatatgttgcagcttgtggatacctatgctgcctcctactctctggtcatcatt
gcaattttcgaactagttggaatttcatatatatatggattgcaaagattttgtgaagat
atcgaaatgatgattggattccagccaaacaggttctggagagtttgctgggctttagtt
actccaactatccttacattcatcctgttcttgagtttgtaccaatggaaggttatgacc
tatgaggactatgtctaccccacttggtcaatggtgcttggatggttgatggtagtctgt
tccgtcatttggattcctattatgtttgtgattaaaatgcatctggcccctggcagtttc
attgagaggcttaagctggtctgttctccacaaccagactggggcccgttcttgatgaag
catcgcggagaacgctacaagaacatgaccgaccccctgggaaccaactctctggggctc
aaactaccaccaaaggattttgaattaggaactcagttttag
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