Polyodon spathula (Mississippi paddlefish): 121330207
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Entry
121330207 CDS
T07273
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03060
Protein export
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
121330207 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pspa02044
]
121330207 (srp54)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
121330207 (srp54)
Secretion system [BR:
pspa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
121330207 (srp54)
Eukaryotic Sec-SRP protein
121330207 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
NPHP3_N
AAA_33
DUF2209
ResIII
AAA_17
AAA
SRPRB
AAA_22
nSTAND_NTPase5
MeaB
AAA_19
MobB
AAA_30
APS_kinase
Zeta_toxin
PduV-EutP
6PF2K
ATP_bind_1
nSTAND_NTPase7
Thymidylate_kin
AAA_18
AAA_16
Torsin
Motif
Other DBs
NCBI-GeneID:
121330207
NCBI-ProteinID:
XP_041132483
LinkDB
All DBs
Position
17:28518047..28525748
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAADGVEKFK
KENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVGRGAGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagctgatcttggaagaaaaataacatcggcgttgcgttcgctgagcaatgca
acaatcatcaacgaagaggttttaaatgccatgctgaaagaagtctgtgcggcattacta
gaagcagacgtaaacataaaactagttaagcagttaagagaaaatgtcaaggcagcaata
gatcttgaagaaatggcatctggtcttaacaaaagaagaatgatacagcatgcagttttc
aaagaactagtcaagcttgttgatccgggggtcaaagcctggacaccaacgaaaggaaaa
aataatgtcatcatgtttgttggtcttcaggggagcggaaaaacaacaacctgttcaaag
ttggcatattactatcaaaggaaaggctggaaaacatgtttgatatgtgcagacacattc
agagcaggtgcttttgatcagctgaaacagaatgcaacaaaagcaagaattcctttctac
ggcagttacacagagatggacccagttattatagctgcagatggtgtggaaaagttcaaa
aaagaaaattttgaaataataatcgttgacaccagtggtcgtcataaacaggaagactcc
ttgttcgaagaaatgcttcaggtttccaatgctgtgcaaccagataacattgtgtatgtg
atggacgcgtctatcggtcaggcttgtgaagcacaagccaaagctttcaaagataaagta
gacgtggcgtctgtgattgtgaccaaactggatggacatgcaaagggaggaggtgctctc
agtgccgttgctgccaccaaaagtcctataattttcatcggtactggagagcacattgat
gactttgagccatttaaaacccagcctttcatcagcaagcttcttggtatgggagacatt
gagggattgatagacaaagtcaatgaacttaagctggatgacaatgaagagttgatagac
aagttgaaacatggtcagtttacattgagagacatgtatgagcagtttcaaaacatcatg
aaaatgggaccttttagtcagatcatgggcatgattccaggatttggaacagatttcatg
agcaaaggtaatgagcaggagtcaatggccaggctgaagaaactaatgacaataatggac
agtatgaatgaccaagagctggacagtaaagatggtgccaagctttttagcaaacagcct
aacagaattcagagagtgggacgaggagctggtgttgccaccagagatgtacaggagctt
ttaacacagtataccaaatttgcacagatggtgaaaaagatgggcggcatcaagggactg
ttcaaaggtggtgatatgtccaagaatgtcaacccatcacagatggcaaaattgaatcag
caaatggcaaaaatgatggatcccagagttcttcaccacatgggtggcatggctgggctc
cagtctatgatgagacagtttcagcaaggtgctgcaggcaacatgaaaggcatgatggga
ttcaacaatatgtga
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