Pseudogemmatithrix spongiicola: Strain318_001337
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Entry
Strain318_001337 CDS
T10301
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspc03110
]
Strain318_001337 (clpB)
Chaperones and folding catalysts [BR:
pspc03110
]
Heat shock proteins
HSP100
Strain318_001337 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
IstB_IS21
ATPase_2
AAA_7
AAA_14
AAA_18
Mg_chelatase
NBD_SMAX1
Zeta_toxin
HAUS2
ResIII
T2SSE
NACHT
Torsin
AAA_25
DNA_pol3_delta2
AAA_6
Motif
Other DBs
NCBI-ProteinID:
WKW14974
UniProt:
A0AA49JUC6
LinkDB
All DBs
Position
1487406..1489991
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AA seq
861 aa
AA seq
DB search
MLKPDRLTVKSSEAITDALALARQAGNPLVHDTHLLLALLQQDEGIVVPILQKLGVAIPA
LTQAVEREIARYPKQSDAQPSLAREVNAVLDAAEAEAKKLGDEYISTEHLLLGLAIAKGS
ESANLLKAQRVTKDGLEDALEQVRGAHRVTDQTPENQYQALQKFTRDLTEDARKGKLDPV
IGRDEEVRRVMQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGDVPESLRNKRLISL
DLGALIAGAKFRGEFEERLKAVLKEITASEGKFVVFIDELHTLVGAGKAEGAMDAGNMLK
PMLARGELRVVGATTLDEYRKHVEKDPALERRFQPVFVGEPTVESTIAILRGLKERYESH
HGVRITDGAVVAAATLSNRYIGDRFLPDKAIDLMDEAASRMRIEIDSLPQEIDEVERKIV
QLEIERQALAKEKDAASVERRTTIEQQLAQLKEQSAGMKAQWQLEKDALGEVGRIKTKID
ESRTQVEQATRSGDLQKAAEIQYGQIPKLESELKAVEARLAEQAGKARYLKEEVTADDIA
EIVARWTGIPVTRMLEGERERLAKLDRELAKRVIGQDEAVQAVANAVRRSRAGLQDPNRP
IGSFIFLGPTGVGKTETARALAEFLFDDEHAMVRIDMSEYMEKHAVSRLIGAPPGYVGYD
EGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSQGRTVDFRNVVIIMT
SNVGSSWILENAGGDWAVVETQVTAALRQQFKPEFLNRVDDIVIFRPLGEAQIGHIVDLQ
LARTAKLLADRKITLELTPEAKAFVAHEGYEPAFGARPLKRAIQRLVQNPLALELLEGKF
HDGDHIRATVRGDALTFERVA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacccgatcgcctcaccgtaaagtccagcgaagctatcaccgacgcgctcgcg
ctcgcgcgccaggccggcaacccgctggtgcacgacacgcacctgctcctcgccctgctc
cagcaggacgagggcatcgtcgttccgattctccagaagcttggcgtggcgattccagcg
ctcacgcaggcggtcgagcgggagatcgcacgctaccccaagcagagcgacgcgcagccg
tcgctggcgcgcgaagtcaacgccgtgctcgatgcggcggaagccgaagccaagaagctc
ggcgacgagtacatctccaccgagcacctactgctcggcctcgccatcgcgaagggctcg
gagagcgcaaatctcctcaaggcgcagcgcgttaccaaggacgggctcgaagacgccctc
gaacaggtgcgcggcgcgcatcgcgtgaccgaccagaccccggagaaccagtaccaggcg
ctgcagaagttcacgcgcgacctcacggaggacgcgcgcaagggcaagctggatccggtc
atcggtcgcgacgaagaggtgcgccgcgtgatgcaggtgctctcgcgccgcaccaagaac
aacccggtgctgatcggcgaacccggcgtgggcaagacggccatcgccgagggcttggcc
cagcgcatcgtgaacggggacgtccccgagtcgttgcgcaacaagcggttgatctcgctg
gacctcggggccttgatcgccggcgccaagtttcgcggcgagttcgaggaacgcctgaag
gccgtgctcaaggagatcaccgccagcgaaggcaagttcgtggtgttcatcgacgaattg
catacgctggtcggcgccggcaaggccgagggcgcgatggacgccggcaacatgctcaag
cccatgctcgcccgcggcgagctgcgcgtcgtcggcgcgaccacgctggatgagtaccgg
aagcacgtcgagaaggacccggcgctcgagcggcgcttccagcccgtgtttgtcggcgag
cccaccgtggagagcaccatcgccatcctgcgcggcctcaaggagcgctacgagtcgcat
cacggcgtgcgcatcacggatggcgcggtcgtcgccgcggccacgctctccaaccgctac
atcggcgatcgcttcctgccggacaaggccatcgacctcatggacgaggccgcgtcgcgc
atgcgcatcgagatcgactcgctgccgcaggagatcgacgaagtcgaacgcaagatcgtg
cagctcgagatcgagcggcaggccctggcgaaggaaaaggacgccgccagcgtcgagcgg
cgcacgaccatcgaacagcagctcgcgcagctcaaggagcagagcgccggcatgaaggcg
cagtggcagctcgagaaggacgcgctcggcgaggtcggtcggatcaagaccaagatcgac
gagtcgcgtacgcaggtcgagcaggccacgcgcagcggcgatctccagaaggccgccgag
atccagtacgggcagatcccgaagctcgagtccgagctgaaggccgtcgaggcgcggctc
gccgagcaggccgggaaggcgcgctacttgaaggaggaggtcaccgcggacgacatcgcc
gagatcgtggcccggtggacgggcatcccggtcacccgcatgctcgagggcgaacgagaa
cgcctagccaagctcgaccgcgagctcgcgaagcgcgtcatcggccaggacgaggcggtg
caggcggtggcgaatgccgtgcgccgctcgcgtgccggattgcaggatccgaaccgcccg
atcggctcgttcatcttcctcggccccacaggcgttggcaagacggagaccgcacgcgcg
ctggcggagttcctcttcgacgacgagcacgcgatggtgcgcatcgacatgtcggagtac
atggagaagcacgccgtgtcgcggttgatcggcgccccgccggggtacgtcggctacgac
gagggcggccagctcaccgaggcggtacgccgccggccgtacagcgtcgtgctcttcgat
gagatcgagaaggcgcatcccgacgtgttcaatatcctcctgcagatcctcgatgacgga
cggctcaccgattcgcagggtcgcacggtggacttccggaacgtcgtgatcatcatgacg
agcaacgtcggctcgagctggatcctcgagaacgccggcggcgactgggccgtggtcgag
acgcaggtgacggcggcgctgcgccagcagttcaagccggagttcctcaatcgcgtggac
gacatcgtcatcttccgtccactcggtgaggcgcagatcggccacatcgtggatctgcag
ttggcgcgcacggccaagctgttggccgaccgcaagatcacgctcgagcttacgccggag
gccaaggccttcgtcgcgcatgagggctacgaaccggcattcggcgcgcggccgctgaag
cgagccatccagcggctcgtgcagaatccgctcgccttggagctgctcgagggcaagttc
cacgacggcgaccacattcgcgcgaccgtgcggggcgacgcgctcacgttcgagcgcgtc
gcgtga
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integrated database retrieval system
