Pseudogemmatithrix spongiicola: Strain318_002934
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Entry
Strain318_002934 CDS
T10301
Name
(GenBank) hypothetical protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00470
D-Amino acid metabolism
pspc00550
Peptidoglycan biosynthesis
pspc01100
Metabolic pathways
pspc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Strain318_002934
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Strain318_002934
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Strain318_002934
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pspc01011
]
Strain318_002934
Enzymes [BR:
pspc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Strain318_002934
Peptidoglycan biosynthesis and degradation proteins [BR:
pspc01011
]
Precursor biosynthesis
Amino acid ligase
Strain318_002934
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
Dala_Dala_lig_N
CPSase_L_D2
B12-binding
TTL
Motif
Other DBs
NCBI-ProteinID:
WKW16518
UniProt:
A0AA49K3B3
LinkDB
All DBs
Position
3225135..3226148
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AA seq
337 aa
AA seq
DB search
MRKLRILVLTHPDLAPPDVLSSLTPKEAFEIKTEIDVISTLRRLGHDVHVLGVQWELRPI
REAVDVLKPDIVFNLLEEFHGETTNDHNVVGFLELMKVPYTGCNPRGLMLSRGKALSKKL
LHYHRIRTPDFAVFPIGRKVRRPRHLAFPLIVKSLIEHSSTGISQASIVDSDEKLAERVR
FIHERVGTDAIAEQFIDGRELYVSVLGNDRLRAFTPWELVAEKGDPSEPLIATAKAKHDL
DYQTKKGIVIRAAQELHPGVEERLLHDSKRIYRILELTGYARIDFRLDAEDRPYFLEANP
NPDIAEHEEFASAANFDGVAYPKLLERIIRLGLRDAE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagctgcgcatcctcgtgctcacgcacccggatctcgcgccgcccgacgtgctg
agctcgctcaccccgaaggaagcgttcgagatcaagaccgagatcgacgtcatctcgacg
cttcgccggctcgggcacgatgtccatgtcctgggcgtgcagtgggagctgcgtcccatc
cgcgaggccgtcgacgtcctcaagcccgacatcgtcttcaacctgctcgaggagttccac
ggcgagaccaccaacgaccacaacgtcgtcgggttcctcgagctcatgaaggtgccctac
accggatgcaacccgcgcggcctcatgctctcgcgcggcaaggcgctctccaagaagctc
ttgcactaccatcgcatccggaccccggacttcgcggtcttcccgatcggtcgcaaggtg
cggcgcccacggcacctcgccttcccgctcatcgtgaagtcgctcatcgagcactcctcg
acgggcatctcgcaggcgtcaatcgtcgattccgacgagaagctggcggagcgcgtgcgc
ttcatccacgaacgcgtcggcacggatgccatcgccgagcagttcatcgatggccgcgag
ctgtacgtcagcgtcctcggcaacgatcgcctgcgcgccttcacgccctgggagctcgtc
gccgagaaaggcgaccccagcgagccgctgatcgcgacggccaaggcaaaacacgacctg
gattaccagaccaagaagggcatcgtcatccgggccgcgcaggagctgcatccgggcgtc
gaggagcgcctgctgcacgacagcaagcgcatctatcgcatcctcgagctcacgggctac
gcgcgcatcgacttccgcctcgacgccgaggaccgcccgtatttcctcgaggcgaacccg
aatcccgacatcgccgagcacgaggagttcgcgtcggcggcgaacttcgacggtgtcgcg
taccctaagctgctcgagcgcatcatccgcctcggactccgcgacgccgagtga
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