Pseudoalteromonas spongiae: PSPO_a0129
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Entry
PSPO_a0129 CDS
T05098
Symbol
birA
Name
(GenBank) BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo00780
Biotin metabolism
pspo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
PSPO_a0129 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspo03000
]
PSPO_a0129 (birA)
Enzymes [BR:
pspo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
PSPO_a0129 (birA)
Transcription factors [BR:
pspo03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSPO_a0129 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
TrkA_TMD
BPL_LplA_LipB_2
MarR_2
HTH_20
DUF3632
RP-C
HTH_5
HTH_36
Mga
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ATC97386
UniProt:
A0A290SYC1
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All DBs
Position
I:124240..125229
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AA seq
329 aa
AA seq
DB search
MSQIKGTKLAVLQALQGGEFISGQHLGEQLGISRAAVAKHIKSLCELGLDIYKVNNKGYC
LKQDIGLIAKAVVENEYQKLSGQIGNFETFASIDSTNTELMQRLASKQVVTSGTVVVAEM
QNAGRGRRGRVWQSPFGANLYYSYYWLLDDGLQAAMGVSVAVGLAVFDCLHTLYGLQVSL
KWPNDILVNNQKLAGVLVELDGQPEGPCHLVIGIGLNIAMPENASEHIDQAWIDLKRLGM
QVDKNVLIAQLTCCLEQRLAQYQLSGLSDMYQEWNNVNAFAEQLVTLNTGQKTWQGICVG
IDQQGGLILRQDGNEKTYYGGEISVRKVM
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaataaaaggcactaagcttgcggtattgcaagcgctgcaaggtggcgagttt
atctctggtcaacatcttggtgagcaactgggcataagccgtgcggcggtagcaaagcat
attaagtcactatgtgagctcggccttgatatctataaagtgaataacaaagggtattgt
cttaaacaagatatcggtttaattgcgaaagcagtggttgaaaacgaatatcaaaaatta
tcagggcagattggtaacttcgaaacatttgcaagtatcgactctacgaataccgaatta
atgcaacgtcttgcaagtaagcaagtggttacatcaggaactgtggttgtagctgaaatg
caaaatgcagggcgcggcagacgtggccgtgtttggcaatcaccatttggtgcgaacctt
tattatagctactactggttactggatgatggtttacaagcagcaatgggtgtcagtgtt
gcggttggtttagctgtatttgattgcttacataccctttatggcttgcaagttagttta
aagtggccaaatgatattttagtgaataaccaaaagttagcaggtgtattagttgagtta
gatggtcaaccagaagggccatgtcatttagttattggtattggattgaatatcgcgatg
ccagaaaacgccagtgagcatattgaccaagcttggattgatctgaaacgacttggcatg
caagtggataaaaatgtgctaattgctcagcttacttgttgtttagagcaacggttagct
cagtatcaactatcagggttaagtgatatgtatcaagagtggaataatgttaatgcgttt
gcagaacaacttgtcacattaaacacgggtcaaaaaacttggcaaggaatatgtgttggc
attgaccaacaaggtggtttaattttacgtcaagacggcaatgaaaaaacctactatggc
ggtgaaatttctgtgcgtaaggttatgtaa
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