Pseudoalteromonas spongiae: PSPO_a2697
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Entry
PSPO_a2697 CDS
T05098
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSPO_a2697 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspo03400
]
PSPO_a2697 (mutM)
Enzymes [BR:
pspo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PSPO_a2697 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PSPO_a2697 (mutM)
DNA repair and recombination proteins [BR:
pspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSPO_a2697 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
HTH_56
Motif
Other DBs
NCBI-ProteinID:
ATC99604
UniProt:
A0A290T5N3
LinkDB
All DBs
Position
I:complement(2588476..2589285)
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AA seq
269 aa
AA seq
DB search
MPELPEVEVSRLGITPHMLNQTVKQVRVHQTQLRWPVPDDVYQLERKVISEISRRAKYLM
ISVDTGSVILHLGMSGNLRVVDNSVPLKKHDHIEIELENGKVLRLNDPRRFGACLWQPAG
EVHSSLLKLGPEPLTDEFDADYLYEKSRQKQTAIKQFLMDNSVVVGVGNIYANESLFKAG
IHPKRAAGKISKKRYQQLVPIVKQTLADAIEQGGTTLKDFAQTDGKPGYFAQKLLVYGRK
GEPCVTCKESLIEIRQGQRSTVYCKNCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaagtgagccgtttaggcattacgccacatatgctaaac
caaacggtgaaacaagtacgagttcatcaaacccaattgcgctggccggtaccagatgac
gtttatcagcttgaacgcaaagtaattagcgagattagccgtcgcgcaaaatacctaatg
attagtgtggatacaggcagtgttattttacatttaggcatgtcgggtaacttgcgggtg
gttgataattctgtaccactcaaaaagcatgatcatatcgaaatagaactcgaaaatggc
aaagtgctacgcttaaatgatcctcgccgttttggcgcttgcttgtggcaaccagcgggt
gaagttcatagcagcttactaaaattaggcccagaaccattaaccgacgaatttgatgct
gattatttgtatgaaaaatcacgacaaaagcaaactgcgattaaacagtttttaatggat
aacagtgtagttgtgggcgtgggtaatatttatgccaatgagtctttatttaaggcgggc
attcaccctaaacgcgcggcaggtaaaatttctaaaaagcgataccaacaattagtgcct
atcgttaaacaaacattagcggatgcaatcgaacagggtggcacaacgttaaaagacttt
gcccaaaccgatggcaagccaggctattttgcacagaagttactagtgtatgggcgtaaa
ggcgagccttgtgtaacctgtaaagagtcgctgatcgaaattcgccaaggacaacgcagt
accgtgtattgtaaaaattgtcagaaatag
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