Pseudoalteromonas sp. PS1M3: PS1M3_22310
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Entry
PS1M3_22310 CDS
T11044
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psps Pseudoalteromonas sp. PS1M3
Pathway
psps02024
Quorum sensing
psps03060
Protein export
psps03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PS1M3_22310 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PS1M3_22310 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PS1M3_22310 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psps02044
]
PS1M3_22310 (ffh)
Enzymes [BR:
psps01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PS1M3_22310 (ffh)
Secretion system [BR:
psps02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PS1M3_22310 (ffh)
Eukaryotic Sec-SRP protein
PS1M3_22310 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
AAA_33
nSTAND_NTPase5
AAA_26
YqeC
ATP_bind_1
APS_kinase
AAA_16
TsaE
AAA_14
KTI12
AAA_31
ABC_tran
KAP_NTPase
SpoU_sub_bind_like
NAT10_TcmA_helicase
AAA_30
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
BBW92144
LinkDB
All DBs
Position
1:complement(2463523..2464902)
Genome browser
AA seq
459 aa
AA seq
DB search
MFENLQERLGKTLKNISGRGRLTEDNIKDTLREVRMAFLEADVALPVVRDFVKQVKERAV
GVEVTKSLTPGQVFVKIVREELEKAMGEANEELSLNAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLATEVDVDFFPSDISQKPVDIATAAITHAK
KKFIDVVLVDTAGRLHVDSDMMDEIKDLHSAINPIETLFVVDAMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRHITDKPIKFMGVGERTDALEPFHPDRIASRILGMGDV
LSLIEEVEMKVDKEQAAKVAEKVFKGAGFTLDDFADQLKQMKNMGGMMSMLDKLPGMSNL
PDAVKGQMGDKTFIQMEAIISSMTKQERARPEIIKGSRKKRIAAGSGTQVQDINKLLKQF
TQMQKMMKKMKGKGGMQKMMRGMKGMLPPGMMGGGGPKF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatctccaagaacgattaggtaaaaccttaaaaaatatcagtggccgtggc
cgcctaacagaagacaacattaaagatactcttcgcgaagtgcgcatggcctttttggaa
gccgatgtggctttgcctgttgttcgcgattttgtaaagcaagttaaagaacgtgcagtg
ggtgttgaggtaactaaaagcttaacgcctggacaagtgtttgtaaaaattgtgcgtgaa
gagcttgaaaaagcgatgggcgaagcaaacgaagagctgagcttaaacgcacaaccgcca
gcagttgttatgatggctggtttgcaaggtgccggtaaaacgaccagtgttggtaaactt
gctaagtttttaaaagagcgcaagaaaaaatcagtgcttgttgttagtgccgatgtttat
cgtcctgcagcaataaaacagcttgaaacgttagccacagaagttgatgtagatttcttt
ccaagtgatatttcacaaaagccagttgatattgctactgcggctattacacacgctaaa
aagaaatttattgatgttgtattagttgatacagcgggtcgcttacatgtggatagcgac
atgatggatgaaattaaagatcttcattcagctatcaacccgattgaaacattatttgtt
gttgatgctatgacgggtcaagatgcggcaaatactgcaaaagcatttgatgaagctctg
ccacttactggtgtgatattaactaaaacagatggtgacgcccgaggcggtgctgcttta
tctattcgtcatattacagataaacccattaagtttatgggtgtgggtgaacgtacagac
gcacttgaacctttccaccctgaccgaattgcatcgcgaattttaggcatgggtgatgta
ctttcattaatcgaagaagtcgaaatgaaagtcgataaagagcaagctgccaaagttgcc
gaaaaagtatttaaaggcgcaggctttacgctagatgactttgctgaccagttaaagcaa
atgaaaaatatgggcggcatgatgtcgatgcttgataaacttcctggtatgtctaattta
cctgacgcggtaaaaggtcagatgggtgataaaaccttcattcaaatggaggctatcatc
agctctatgacaaaacaggagcgagctcgtccagaaatcattaaagggtcgcgtaaaaaa
cgtattgcagcaggttctggtacacaggtacaagacatcaataagttgcttaaacaattt
acgcagatgcaaaaaatgatgaaaaaaatgaaaggcaaaggcgggatgcaaaaaatgatg
cgcggtatgaaaggcatgttgccaccgggcatgatgggcggcggcggtccaaaattttag
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