Pandoraea sputorum: NA29_24305
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Entry
NA29_24305 CDS
T03554
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspu03036
]
NA29_24305
Chromosome and associated proteins [BR:
pspu03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NA29_24305
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
Phage_integr_3
Motif
Other DBs
NCBI-ProteinID:
AJC18297
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Position
complement(4594094..4595062)
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AA seq
322 aa
AA seq
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MLTRSTSLIDQFCDTIWLEDGLSRNTLDAYRRDLRLFAEWLADDAKASDAANGADKLHNI
PHKTSHDSPPAMSLDTVDEAALSAYLAWRRESLASSVNRRLSVFKRFYQWALREHLVQQD
PCLRIASAKRAQRLPSTLSEAQVEALLAAPDLAQPLGLRDRAMLELMYASGLRVSELVAL
KTIEVGLNEGVLRIFGKGAKERLVPFGEEANGWLTRYLAHSRGVLLAGRACDTLFVTQRG
DGMTRQAFWYLIKRYALQADIRAPLSPHTLRHAFATHLINHGADLRVVQLLLGHADISTT
QIYTHVARERLKSLHAQHHPRG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgcgcagcacgtcgctcatcgaccagttctgcgacacgatctggctcgaagac
ggcctgtcgcgcaacacgctcgacgcctatcgtcgcgatctgcgtctgttcgcggagtgg
ctggcggacgatgcgaaagcgtcggacgcagcgaatggcgcggacaaattgcacaacatc
ccgcacaagacctcgcacgacagcccgcccgcaatgtccctcgacaccgtggacgaggcg
gcgctctcggcctatctcgcatggcgccgggagagtctggcgagtagcgtgaaccggcgt
ttgtccgtcttcaagcggttctatcaatgggcgctgcgcgagcacctcgtgcagcaggac
ccgtgcttgcggattgcgtcggccaaacgggcgcagcgcttgccatcgaccttgtcggaa
gcgcaggtcgaggcgctgctcgccgcgccggatctcgcgcagccgctcggtttgcgcgac
cgcgccatgctggagctgatgtatgcgagcggcttgcgcgtgtcggagctggtcgcgctc
aagaccatcgaagtgggactgaacgaaggcgtgctgcggatcttcggcaagggcgcgaag
gagcgtctggtgccgttcggcgaagaggcgaacggctggctcacgcgctatctggcgcac
agtcgtggtgtgttgctcgcgggacgcgcgtgcgacacgctgtttgtgacgcaacgcggc
gatgggatgacgcgtcaggcgttctggtatctgatcaagcggtacgcgctgcaagccgat
attcgtgcgccgctctcaccgcacacgctgcgccacgcgttcgccacgcacctgatcaat
cacggtgcggatttgcgcgtggtgcagttgttgctcggccacgcggacatctcgacgacg
cagatctacacgcacgtcgcgcgcgagcgtctcaagtcgctgcacgcgcagcatcacccg
cgcggctga
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