Punctularia strigosozonata: PUNSTDRAFT_94235
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Entry
PUNSTDRAFT_94235 CDS
T03131
Name
(RefSeq) nucleoporin-interacting protein NIC96
KO
K14309
nuclear pore complex protein Nup93
Organism
psq
Punctularia strigosozonata
Pathway
psq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PUNSTDRAFT_94235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_94235
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PUNSTDRAFT_94235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
DUF4096
Spectrin
Motif
Other DBs
NCBI-GeneID:
18886612
NCBI-ProteinID:
XP_007378150
JGI:
94235
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MADLSSLLNSAQALTSHLSRPDLPSVKLSLDQIEAQSRRLVARQPGTSTDNDKANYLLAQ
AHVDAPALASSIAHLNTAATFTPLQALQDTDVAGYLRHAHEQNIISTIEEGRRETQAEFY
RLLRERGRKTWEAKKRRVFEELGGRVSGDAKAVGELKKSFRGKAVLAASTGPSVSLQTQS
KMMAYDRVIGDLNNARLRGTSYPIIHSLMQAAASLPIDSITQQWLQNLHVLSKIAAEPPS
LPPLEHAGAHILNTPLFERKHARVYLGSQESREAVALRRQIARGGREALEEQYWDIVERT
LQQRPLEAMVGGDPSVANRIRAFVGMRHFRSGEWEERIEIVKGSPMWAQLFYLIRTGHAE
EALAEAVKHQTAIEHRESGFVTHFRAWLESPDRKLPKPQRDHLQSVYNAHMLHSSTADPF
KLALYKLMGKLEPTRRTVALVTMTTEDWLWFQLSMADEDEQGGLRGLAQVLLGYGEQHFD
GPAGQKSRRGVWAGVLLMCGQFERAVAALWEHQETEVEAVHLAIALAYHGLLRVPSRAET
SEMTPLSLPANGPPALSLTTLVWRYIRQFVKMDAKEALQYVYCVCLSADQGDGVGRQQVE
NAWELVRRIIVLANTGAAWEELVGGFRPDGTRFAGVIEQGASLLKLSDSREFNEQILIRA
AKHSEQNDRLPEAIKLYNLAGDYATVIACLAQALGNTIANPSGGEGDKARTIERTAAEIL
RHYERTNRAVGKDREAVVRLLRIREAMDAKDAGRVDVALDVIESTDLIPLDGDVAKITRR
AEEFKDLHEALQRNLQTYLTLTMDCLAGVHHRVKESGLADANRQMTLAALRKKSRSLMVF
AGILKYRMSPDVYSYLARLDVEIAL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctctcgtcgctgctcaactcagcgcaggccctaacctcgcacctgtcgcgg
ccggacctgccgtccgtgaagctttctctggaccagattgaggcacaatcccgccgcctt
gttgcacgtcagcctggaacatccacggataacgacaaggcgaattacctcctcgcccaa
gcgcacgttgatgctccagcgctcgcctcgtccatcgcgcatctcaacaccgctgctacc
tttacacctcttcaggcgctccaggataccgatgtcgcgggttatctccggcacgcgcat
gagcaaaatattatttctaccatcgaagaaggtcgacgcgagacgcaggccgagttctac
cgtcttttgcgtgagcgggggcgcaagacatgggaggcgaagaaacggcgggtgtttgag
gagcttggtggtcgcgtgtctggtgacgcgaaagctgtcggcgaactgaagaaaagcttt
cgcggcaaggcggttttggcggcgagcacgggtcccagcgtcagtctgcagacgcagagc
aagatgatggcgtatgaccgcgtcatcggggacctcaacaatgctagattacgaggtacc
tcataccccatcatccactcactcatgcaagccgccgcctcgcttccaatcgattcaatc
acacaacaatggcttcaaaatctgcacgtcctatccaaaattgccgccgagccgccctct
ttacctccgctcgagcacgcaggcgcgcacatcctcaacacaccactctttgaacgcaag
catgcgcgcgtctatttgggctcgcaagaatcgcgcgaagccgtcgcgttgcgccgacag
attgccaggggcgggcgggaggcgctggaagaacaatactgggacatcgtggagcggacg
ctgcaacagaggccgctggaggcgatggtaggcggtgatccgagcgtggcgaacaggata
agagccttcgtggggatgcgacatttccggagcggggagtgggaggagcgaattgagata
gtcaaaggttctccgatgtgggcgcagttgttctacctcattcgaacagggcatgcggag
gaagcgctggcagaggctgtgaaacatcagaccgccatcgaacaccgcgaatctggcttc
gtcactcacttccgagcatggctcgaatctccggatcgcaaacttccgaaaccccagcgt
gatcacctgcaatcggtgtacaacgcacatatgcttcattcctcaaccgcggatcctttt
aagctcgcgttgtacaagcttatgggcaaactggagcccacccgacgaaccgtagcgctt
gtgacgatgaccaccgaggattggttatggttccaactctcaatggcagacgaagatgag
cagggcggcctccgtggcttggctcaagtgctattaggctacggcgaacagcactttgac
ggtcctgccggtcaaaagtccaggcgtggcgtttgggccggtgtgttactcatgtgcggg
caattcgaacgggcagtagccgcgttgtgggagcaccaggagacggaagtggaagccgtt
cacctagccatagcgctcgcgtaccacggtctcttgcgggtgcctagcagagcagaaaca
tccgagatgacacccttgtcccttccggcgaacgggccacccgcgcttagcctcacgacc
ctcgtctggcgctacatccgccagttcgtcaaaatggacgccaaagaggcgttgcaatac
gtctactgtgtgtgtctctctgcggaccagggcgacggcgtcggccggcagcaagtcgaa
aatgcttgggagctcgtccgacgcattatcgtcctcgccaacactggggccgcctgggag
gaactcgtgggcggcttcaggcccgacggcacgcgcttcgctggcgtcatcgaacagggc
gcttcgttgctcaagctgagcgacagccgcgagttcaatgagcagatcttgatccgcgcc
gcgaagcattcagaacaaaacgatcgcctgcccgaggcgatcaaactgtacaacctcgcg
ggtgactacgcaacagtgatcgcgtgtctcgcgcaggcgctcgggaacacgatcgcgaac
cccagtggcggggagggtgataaggcgcggacgatcgaacgcacggcggctgagatactg
cggcactacgagcgcacgaatcgcgcggtaggcaaggaccgggaagcggtcgtacgacta
ttgaggatcagggaggcgatggacgccaaggacgctggccgcgtcgatgtggcgttggat
gtcatcgaatctacggatctgatcccgctcgatggtgatgtcgcgaaaatcacaagacgg
gcagaagaatttaaggaccttcacgaggccctgcaacggaacctgcaaacatacctcacg
cttaccatggattgtctggcaggcgtgcatcaccgagtcaaagaatcgggtctagcggat
gccaatcgtcaaatgacccttgctgctctccgcaagaaatcacggtcgttgatggtcttt
gcaggcatcttgaaataccggatgtcccccgatgtatattcatatcttgctcggttggat
gttgagatagctttgtaa
DBGET
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