Stutzerimonas stutzeri DSM 4166: PSTAA_0994
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Entry
PSTAA_0994 CDS
T01976
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
psr
Stutzerimonas stutzeri DSM 4166
Pathway
psr02020
Two-component system
psr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSTAA_0994 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSTAA_0994 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psr03021
]
PSTAA_0994 (rpoN)
Transcription machinery [BR:
psr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSTAA_0994 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Acyl-CoA_dh_C
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEA82904
LinkDB
All DBs
Position
complement(1082594..1084078)
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AA seq
494 aa
AA seq
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MGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPMLEREEDGDDFDGSDPMAEAVDR
SSDAGSEKISTQESTYEEPSHSGEGLDEADWGERIPSELPVDTAWEDIYQTSASSLPSND
DDEWDFTSRTSSGVSLQSHLLWQLNLAPMSDTDRLIATTLIDCINDQGYLEESLQEIVDS
FDPELEIELDEVEVVLRRVQQFEPAGIGARDLRECLLLQLRQLPDRTPWLSEAQRLVSDH
LDLLGSRDYSLLMRRMKLKEDELRQVIELIQSLNPRPGSQIEASEPEYVVPDVIVRKHSD
RWLVELNQDAMPRLRVNAQYASFVKRADSSADNTFMRNQLQEARWFIKSLLSRNETLMKV
ATQIVEHQRAFLEHGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYELKYFF
SSHVSTAEGGECSSTAIRAIIKKLVAAENPKKPLSDSKIAGLLEAQGIQVARRTVAKYRE
SLGIAPSSERKRLL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggccagcagctgacgatgacaccgcagctgcaacaggccatacggctcctccagctt
tccaccctcgatctgcaacaggagatccaggaagcgctggattccaatcccatgctcgag
cgtgaagaggacggtgacgacttcgacggctccgaccccatggccgaggccgtcgatcgt
tcgagcgacgctggcagcgaaaagatcagcactcaggaaagcacctatgaagagccttcg
catagcggcgaaggcctcgacgaggccgactggggtgagcgcattcccagcgagctaccg
gtggacaccgcctgggaagacatctaccagaccagcgccagcagcctgccgagcaacgac
gacgacgaatgggacttcaccagccgtacgtccagcggtgtcagcctgcagagccatctg
ctctggcagctcaacctcgcccccatgagcgacaccgaccgcctgatcgccaccacactg
atcgactgcatcaacgatcagggctatctcgaggagtctctgcaggaaatcgtggacagc
ttcgacccggagcttgaaatcgagctcgacgaggtcgaagtcgtgctgcgtcgcgtacag
cagttcgaacctgccggtatcggcgcacgggatttgcgcgaatgcctgctcctgcagctg
cgccagctccctgaccgcaccccttggctcagcgaagcccagcggctggtgagtgaccat
ctggacctgctgggtagccgcgactacagcctgctgatgcgccgcatgaagctcaaggaa
gacgagctgcgccaggtcatcgagctcatccagagcctcaaccctcgcccgggctcgcag
attgaggcgagcgagccggagtacgtggtgccggacgtcatcgtacgcaagcacagcgat
cgctggttggtggaactcaaccaggacgccatgccccgccttcgcgtcaatgcccaatac
gccagcttcgtaaagcgcgccgactcgagtgccgacaataccttcatgcgcaaccagctg
caggaagcgcgctggttcatcaagagcctgctcagtcgcaacgaaacactgatgaaggtc
gccacccagatcgtcgagcaccagcgtgccttcctcgaacacggcgacgaggcgatgaag
ccgctggtgctgcacgacattgccgaagccgtggggatgcacgagtcgacgatttcccgc
gtcaccacgcagaaatacatgcatacgccgcgtggcatctacgaactcaaatacttcttc
tccagccacgtcagcacggcggaaggcggcgaatgttcgtccaccgcgatccgcgcgatc
atcaagaagctggtcgccgcggaaaacccgaaaaagccgttgagcgacagcaagatcgct
ggtttactggaggcgcagggcatccaggtggcccgccgcaccgttgcgaaataccgcgag
tcgctcggtatcgcaccgtccagcgagcgtaaacgattgctgtga
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