KEGG   Pseudoalteromonas sp. R3: ELR70_21335
Entry
ELR70_21335       CDS       T10968                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
psrr  Pseudoalteromonas sp. R3
Pathway
psrr02024  Quorum sensing
psrr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psrr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ELR70_21335
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ELR70_21335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psrr03019]
    ELR70_21335
   03036 Chromosome and associated proteins [BR:psrr03036]
    ELR70_21335
Messenger RNA biogenesis [BR:psrr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ELR70_21335
Chromosome and associated proteins [BR:psrr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ELR70_21335
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AZZ99396
LinkDB
Position
1:complement(3704429..3704692)
AA seq 87 aa
MAKGQSLQDPFLNVLRRERIPVSIFLVNGIKLQGKIQSFDQFVILLENTVNQMVYKHAIS
TVVPARAVNFQNTQGNDSAEHGEDGNF
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcaaaaggccaatcgttacaagacccatttttgaatgtcttacgtcgtgagcgcatt
cccgtttccatctttttagttaacggtatcaaattacaaggcaagatccagtcctttgat
cagttcgtcatcttgcttgaaaacacagtaaatcagatggtttacaaacacgccatttcg
accgtggtgcctgctcgtgctgtaaatttccagaacacacaaggcaatgacagtgcagaa
catggcgaagatggtaacttttaa

DBGET integrated database retrieval system