KEGG   Pseudomonas sp. RU47: CCX46_10390
Entry
CCX46_10390       CDS       T11150                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
psru  Pseudomonas sp. RU47
Pathway
psru00040  Pentose and glucuronate interconversions
psru01100  Metabolic pathways
psru02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:psru00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    CCX46_10390
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CCX46_10390
Enzymes [BR:psru01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     CCX46_10390
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: AZZ75540
LinkDB
Position
complement(2321568..2322710)
AA seq 380 aa
MTKPTTFTACKLASAIVGSLLFSSLPAQAADIWLDVATTGWATQNGGTKGGSRAAANNIY
TVKNAAELKAALSASVGTNGRIIKITGPIDISEGKAYTTTADMKKRGRLDIPGKTTIVGT
SSTAEIREGFFYAKENDVIIRNITLENPWDPEPIWDANDGSAGNWNSEYDGLTIEGANNV
WVDHVTFTDGRRTDDQNGTANGRPKQHHDGALDVKNGANYVTISYSAFKSHEKNNLIGSS
DSRTTDDGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSHKVYPFSYAHGVGK
NSKIFSEKNAFEISGISGCDKIAGDYGGSTYLDQGSTLNGTLLTCKWGTNIGWTPPYSYT
PLNADKVAADVKAKAGAGKI
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgacaaaaccaacaaccttcacggcctgcaaactggccagcgccatcgtcggcagcctg
ctgttttccagcctgcctgcacaagcggccgatatctggctggatgttgcaacgactggc
tgggccacgcaaaacggtggtaccaagggtggctccagagcggcagccaacaacatctat
accgtgaagaacgccgccgaactgaaagccgcactcagcgcttcggtcggcaccaacggt
cgcattatcaagattaccgggccgatcgacatcagcgaaggcaaagcttatacgacgacc
gccgatatgaaaaagcgcggtcgtctggatatcccgggcaagacgaccatcgtcggtacg
agcagcacggcggagatccgcgagggtttcttctatgccaaggaaaacgatgtgatcatc
cgcaacatcaccctcgaaaacccgtgggatcccgagccgatctgggacgccaatgacggc
agcgccggcaactggaactccgagtacgacgggctgaccatcgaaggcgccaacaatgtg
tgggtcgaccatgtcaccttcaccgatggccgccgcaccgatgaccagaacggcaccgcc
aacggtcgtccaaagcaacaccacgacggcgcactggacgtgaaaaacggtgccaactac
gtgaccatttcctactcggcgttcaaatcgcacgagaagaacaacctgatcggttccagc
gacagccgtaccaccgatgatggcaagctcaaggtcacgatccacaacaccctgttcgaa
aacatctctgcacgcgcgccacgcgtgcgcttcggccaggtgcatctgtacaacaactat
cacgtgggcagcaccagccataaggtctacccgttcagctacgcgcacggcgtgggcaaa
aactcgaagattttctccgagaaaaacgccttcgaaatctccggcatcagcggctgcgac
aaaatcgccggcgactacggtggcagcacctaccttgatcagggttctacgctcaatggc
accttgctgacctgcaagtggggcaccaacatcggctggaccccgccttacagctacacc
ccgctgaacgcagacaaagtcgcggccgacgttaaggccaaggctggcgctggcaagatc
tga

DBGET integrated database retrieval system