KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102444865
Entry
102444865         CDS       T02980                                 
Symbol
POLQ
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pss03400]
    102444865 (POLQ)
Enzymes [BR:pss01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     102444865 (POLQ)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    102444865 (POLQ)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc DUF4332
Other DBs
NCBI-GeneID: 102444865
NCBI-ProteinID: XP_014433968
Ensembl: ENSPSIG00000013657
LinkDB
Position
Unknown
AA seq 2643 aa
MAAGSGGRPRRGGRARSLGDCVLFGSAGPARPVLSPPPGLERSLRRSGSPSCSEFFSKGQ
CQQMNVPDDQADKLLLASWGLPKLVLEKYHSLGVVHMFEWQAECLMLGQVLEGKNLVYSA
PTSAGKTLVAELLILKRVLETHKKALFILPFVSVAKEKKYYLQTLFQEVGVRVEGYMGST
SPAGRFSALDVAVCTIERANGLINRLIEENKMDSLGMVVVDELHMLGDSHRGYLLELLLT
KVRFVTEKIAKRQTKENTSPISNSIQIVGMSATLPNLDHLASWLNAELYHTDFRPVPLME
WVKIGSNIYDSSMKLVREFQPMLQVKGDEDHIVSLCYETIRDGHSVLLFCPSKNWCEKLA
DIIAREFYNLQLWSLQHAERFTKTSELLPVALDKKAIEEVMDQLRRSPSGLDSVLKRTLP
WGVAFHHAGLTFDERDIIEGAFRQGLIRVLAATSTLSSGVNLPAHRVIVRTPVFGGRLLD
ILTYKQMAGRAGRKGVDTVGESILVCKPSERSKGIALLQGSLKPVHSCLLRKEGERVTSS
MIRAILEIIVGGVANTPEDVRTYASCTLLAASLKDGEQGSGRGEEKAQNGAVEACVRWLL
ENEFIQVLDSGNGVKAEIYHPTHLGTATLSSSLSPTEALGIFADLQRAMKGFVLENDLHI
LYLVTPVYEEWTAIDWYQFFCLWEKLPSSMKRVAELVGIEEGFLARSVKGKIIAKTEKQH
RQMAIHKRFFTSLALLDLINEVPLKDITKKYNCSRGQLQSLQQSAATYAGMVTVFSNRLG
WHNMEQLLSQFQSRLMFGVQRELCDLVRISLLNAQHARILYNAGFITVADLAKGNTAEVE
VALKNAVPFKSIRRAVDEDEEAGEGRWDTHWMRNTHCIWMAGMKGLTEGEAASLIVEEAR
ILLQQDLARMGVQWNPDSFLESDTSSMTSSESELEDRKYKQNGERSLGTLKVFSNERYRI
LTDNGTNFQAGKSSNIKKGHKRLLNASVSDSRSHSELQEDHTQKKESNGDSITCNARKRP
NLRKGKENKEVTFLTKSSAATIQEFPTQKGKRPTLNCTSQKTSKTSGCRMTMDTSFSQIE
GKSIDPKHFRLDKSVMHTTELNGPSVSSHSKSKDKSFSHQRKKRFGENKSSSHKSFTVKG
SESLQVNKVQPESKEIMKELLTEPSISNKASPKETVLGLEARHTEMRDAPPMNVVIDDNM
GNLGISSRSAKNENSDLKQNNIQSVKNCAEKMYSKQQMILGTYLCNEADSSSANMYGSIG
ISKQKTVYFYPEENTSFHFQIQNDGKTSFEKPSGMLQTGGKADNKQEDFLKDSTVKSGAL
CVPKDVKNGYSPDLYSVSKEFEDSFQLDTQTDRILQQLMAAEIAKQWGEKETERTKIPVQ
NISMKLHCASTLQNEDVADEKLAAALRKVVCSSLGTANTMKETTDLHCTNALGSRSTNVQ
SSMKCTESAFCLKGNDCSFTDSQLYSFLQGYQTQNSVKENVSKDLQKAVSPCNGQHPHTV
LVQVECHPPPETSLNFSGSLLFDESFNNVSGSPTMHADDAQGAESGKQKVVTLSSKATSS
SLDDLLHQQNLGPIQDVLTVDINVSEQHPAPCDDESVIFSDIDSFQMAEALGNVDLPPYQ
GDSPSAVLVELGLRKTRHEENDHRPEDSRLDQGERPQNSQQAVGKNTNPVVWSDHSFNLS
PELQDILDRWPSPSDNKPVVLSPKVFSSIGKLVNSNSKQEPGAISEFSCCPRESSSTCQG
LKNYFKVKESNKGVLDVQKPAYNHLLLKGSNRLSDPQLDISNGFIPQTSPKEPVPKSFGT
SSLMFGKNKNVSHIDEVPSFQPLKNSKSTSDHLIKTLPFNPGTEETCEVLLETNTVKDNS
VIDQSFSLQLSQDVLPLVSCSAESFSIIDVASDKALFHTFIREWRNKSRFAISLACERTK
CLLSPMSTIGGRFKQVRSPQRFQVKDDGFPIKGCEDILVVGLSVCWGGKDAYYISLQEKQ
DRQTEISASLAPPPLDQDLSVTERLCQVQSCLQKESEGEHSLIMYNLIQHYXCGISLEGS
FEDPKIACWLLDPGSKERTLHNMVTNFLPHELPLIEGLGTGQGVQSLGLGTSADYSGRYR
AAIESVLIFNTMNQLITLLQKENLTDVFHKVEMPTQYCLALLELNGIGFSTTECETQKQV
MQAKLNEIEAQAYQMAGHSFSLTSPDDIAEVLFLELKLPPNGDVKIQGNKKTLGYTRRAT
ANGNRVRLGKQFSTTKDILEKLKALHPLPGLILEWRRITNAMTKVVFPLQREKRLNPALG
MERIYPVSQTHTATGRVSFIEPNIQNVPKDFEIEMPTVVAESPPSQARGCGSTFLGNRGR
KRCSTLPCGLKVLAYEGSKGRGMPFSVSMRHAFVPFSGGLILAADYSQLELRILAHLSRD
RRLIEVLNSGADVFKSIAAEWKMIDPEAVGNEIRQQAKQICYGIIYGMGAKSLGEQMGIE
ENDAACYIESFKSRYPGIQTFLKETVKKCSRDGFVQSILGRRRYLPSIKDPNPYSKAHAE
RQAVNTAVQGSAADIVKTATVNIQRQLEAFPSAVKSHGHLESLFQSNRTGRLDRRRNRAK
LQSGGFFILQLHDELLYEVAEDSVIQVAQIVKHEMENAIKLLVKLNVKVKIGPSWGDLQE
LEL
NT seq 7932 nt   +upstreamnt  +downstreamnt
atggcggccggtagcggcgggaggccgaggcggggtggccgggcccgctccctgggggac
tgtgtcctattcgggtccgcgggccccgcccggcccgtgctgagccccccgcccggcctg
gagcgctccctgcggcgcagcggcagcccgagctgctcagaatttttctccaaagggcaa
tgccaacagatgaatgttcctgatgaccaagcagacaaactgctcctagcaagctggggt
cttcccaaactagttctggagaaataccacagtctgggagtagtgcatatgtttgaatgg
caagcagagtgcctgatgcttggacaagtcctggaggggaagaacctggtttattcagct
cctactagtgctggaaagacattagttgctgagttactcatcttgaagagagtcctggag
acccataagaaagctctgttcatcctcccttttgtttctgtggccaaagagaaaaagtat
tatttgcagactctgtttcaggaggtgggtgtgcgggtagaaggctatatgggaagcacc
tcccctgctggacgtttctcagcattggatgttgccgtctgcaccattgagagagccaac
ggattaatcaatagactcattgaggagaacaagatggactcattgggaatggtggttgtg
gatgagttgcacatgctgggagattctcaccgaggatatctgctggaactcctgctcacc
aaagttcgatttgttacagagaaaattgctaaaagacagacaaaggagaatacttctcct
atttctaacagcatacagatagtaggcatgagtgctacccttcctaatctggaccatctg
gcctcctggttgaatgctgagctgtaccatactgattttcgtcctgtacccctcatggaa
tgggtgaaaattggcagtaatatttatgattcttcaatgaagctggtgagggaattccaa
cccatgctgcaagtcaagggagatgaagatcatattgtgagcctgtgttatgaaactatt
cgtgatggtcattcagtcctgctcttctgtccatcgaagaactggtgtgaaaaactggca
gacatcatagccagggaattctacaaccttcagctctggtccttgcagcatgctgagagg
tttacgaaaacgtcagaacttttaccagttgccttggacaagaaagcaatagaggaggtg
atggaccagctgaggcgctcaccctcaggtctggattctgtgctcaagcgtactttacca
tggggagtggcatttcatcatgcaggtcttacttttgatgaacgggatatcattgaaggg
gcctttcgccaagggttgattcgagtcctggcagcaacatccaccctttcttctggggtg
aatctgcctgcacaccgggtaattgtccgaacacctgtatttggtggtagactcctagac
atcctaacttacaaacagatggctgggagggcaggaaggaaaggagtagacacagtgggt
gaaagtattctagtatgcaagccctctgagagatcgaaaggcattgctctgcttcaggga
tcgctcaagccagtccacagctgtttgctcagaaaagagggggaaagggtaacctctagc
atgatacgagcaatcctggagatcatagtgggtggagtggccaatacgccagaagatgtg
cgaacctatgcttcctgcacacttcttgctgccagtctgaaagatggtgagcaaggaagt
gggagaggtgaagagaaagctcagaatggagctgttgaggcttgtgtgagatggctgcta
gagaatgagttcatccaggttttagactctggtaatggagtaaaagcagagatctatcat
ccaacacaccttggtacagctactctttcctcttctctgtcaccaactgaggctctggga
atctttgctgacctccaaagagcaatgaagggttttgtcctggagaatgacctgcatatt
ctctatttggtcactcctgtgtacgaggagtggactgctattgactggtaccagtttttc
tgcctgtgggagaaattgccttcttctatgaagcgagtggctgagttggtggggattgaa
gaaggcttcttggctcgctctgtaaagggcaaaatcatagccaaaacagaaaaacaacac
agacaaatggccattcataaaaggtttttcaccagccttgctctattggatttaatcaat
gaggttcccttaaaagatattactaagaaatataactgtagtcgtggccagcttcagtcc
ttgcaacagtctgctgccacctatgcagggatggtaacagttttttctaaccgcctgggg
tggcacaatatggaacagttgctctcccagtttcagagtcgccttatgtttggtgtccaa
agggaactgtgtgacctggttcggatatctctgctaaatgcacagcatgccagaattctt
tataatgctggcttcatcacggtggctgatcttgctaaaggaaatactgctgaagtagaa
gttgctttgaagaatgcagtaccattcaaaagcattcgtagggcagtggatgaagatgaa
gaggcaggcgaaggacgttgggatacccactggatgcggaatacccactgtatctggatg
gcgggaatgaagggcctaaccgaaggtgaagcagcatcccttattgtggaggaggctaga
atactcctacagcaggacttggctaggatgggagtgcagtggaatccagattcttttctt
gagtctgatacatcttccatgaccagcagtgaatcagagctggaggacagaaaatataaa
cagaatggggaacgttcactcgggactttgaaagtattcagcaatgaaaggtacagaatt
ctaactgataacggcaccaattttcaagctgggaagtcatcaaatattaaaaagggacat
aaaaggttgttaaatgctagtgtatcagactccaggtcccatagcgaactgcaggaagat
cacacccagaaaaaggaaagcaatggtgattccatcacatgcaatgctagaaagcggcca
aatttgagaaaaggtaaagaaaacaaggaagttacttttctgaccaaaagcagtgcagca
actattcaagaattccctactcaaaaaggaaaaagaccaaccttgaactgcacttcacag
aaaacttctaaaacatctgggtgcaggatgactatggacactagtttcagccaaattgag
ggcaaaagcattgatccaaaacatttccgacttgataagtcagtgatgcacacaacagag
ttaaatgggccctctgtatctagccatagcaagtctaaagataaatctttttcacaccaa
aggaaaaaaagatttggagagaacaaatcatcttctcacaagagtttcactgtcaaaggt
tcagaatctttacaggtgaataaagtgcaaccagaaagcaaagagataatgaaggaatta
cttacagaaccttccatctctaataaagccagtcctaaagaaacagtgcttggtctggaa
gctaggcatactgaaatgagggatgctccacccatgaatgtggtgatagatgataatatg
ggaaacctgggaatttctagcaggtcagcaaaaaatgaaaacagtgatttaaaacagaac
aacatccaatcagttaaaaactgtgctgaaaagatgtattccaaacaacaaatgattcta
ggcacatatctttgtaatgaggcagacagcagttctgcaaacatgtatgggagcatcggt
attagcaaacagaaaacagtttatttttatcctgaagagaatacatctttccattttcaa
attcaaaatgatggcaaaacaagttttgaaaagcccagtggaatgttacaaactggaggt
aaagcagataacaagcaagaggattttttgaaagattctacggtaaaatctggagctctt
tgtgttccaaaagatgttaaaaatggctattctcctgatctgtattcagtttccaaagaa
tttgaagacagcttccagttggatacacagactgataggatattacagcagctgatggca
gctgaaattgcaaaacagtggggagaaaaagagacagagcggacaaagatacctgtgcag
aacatttccatgaaactacactgtgccagcactttacaaaatgaagatgttgcagatgaa
aagctagctgcagcacttagaaaagtggtctgttcaagtctggggacagcaaatactatg
aaagaaacaacagatttacattgcactaatgctttgggctctagaagcactaatgtacag
tcttcaatgaaatgcacagaatctgcattttgtcttaaaggaaatgattgttctttcact
gactcacaactatatagctttttacaaggttatcagacccaaaattcagttaaggaaaat
gtctctaaagatcttcagaaggcagtctctccctgcaatggccagcaccctcacactgtg
cttgtacaagttgagtgccacccgcctcctgaaactagtctgaatttcagtggcagttta
ctttttgatgaaagcttcaataatgtcagtggctctccaactatgcatgcagatgacgct
caaggggcagaatctgggaaacagaaagttgtgactctttcttctaaagccacttctagc
tctcttgatgatcttttgcatcagcagaacttggggcctattcaggatgtattaactgtc
gatataaacgtcagtgagcagcatccagcaccgtgtgatgatgagtctgttatattctct
gatatagattctttccagatggctgaagctttaggtaatgtagacttacctccatatcaa
ggagacagtccatctgcagttcttgttgaactagggttaagaaaaacaaggcatgaggag
aatgatcacagaccagaggactcaagactggatcaaggtgaaagaccccagaattcccaa
caagctgtgggaaagaataccaatccagtggtatggtctgatcattcatttaacttaagc
ccagagttgcaagatattttagacaggtggcctagtccttcagataataaacctgttgtt
ttaagtccaaaagtcttctcctcaataggaaagttagtaaactcaaatagtaaacaagag
cctggagcaatttctgaattcagctgttgtccaagagagtcgtcatccacttgccagggt
ttaaagaattatttcaaagttaaagagagcaataagggagttctggatgttcagaaacca
gcttacaaccatctgctgctcaagggaagcaacagattatctgacccccagctagatatc
agcaatggatttatacctcaaacatctcctaaagaacctgttccaaagagttttggcaca
tcctctctaatgtttggaaaaaacaaaaatgttagccacatagatgaagtcccatctttt
caaccattgaaaaatagcaaatctacttcagatcacctgataaaaacactgccatttaat
cctgggactgaagaaacatgtgaggttttgcttgagactaacactgtaaaagacaattct
gttatagaccaaagcttttcactgcaactatctcaagatgttttgccacttgtttcctgc
agtgctgaaagtttctctattattgatgtagcaagtgacaaagctctcttccataccttc
atcagagaatggaggaacaaaagcagatttgccatttcactggcttgtgaaagaacaaaa
tgcctcttgtcccccatgtcaactataggtggcagatttaaacaagtacgatctccccag
cggttccaggttaaagatgatgggtttcctatcaaaggctgtgaagacatcttggtggtt
gggttgtctgtgtgctggggtggaaaggacgcctattatatctcattgcaggagaagcaa
gatcgccagactgaaatcagtgccagcttggcaccccctcctttggatcaggacctgtct
gtgactgagagattatgtcaagtacaatcctgcttgcagaaagaatctgagggggagcac
tcacttatcatgtacaacctcatccagcattatnnttgtgggatctccctggagggaagt
ttcgaggatccaaagatagcatgctggctgctggatcctggctctaaggagcgaaccctt
cacaacatggtgaccaattttctccctcacgagctgcccttgattgaagggctgggaact
ggccaaggggttcaaagcctgggacttggtaccagtgctgattactctggccggtaccga
gcagccatagaatctgtcctcattttcaacaccatgaaccaactcatcaccctgttgcag
aaagaaaatctaacagatgttttccataaagtggagatgcccactcaatactgcttggcc
ctgctggaactgaatggaataggttttagcacaacagagtgtgagacccaaaaacaggtt
atgcaagctaaactgaatgagattgaggctcaggcttatcagatggcaggccacagcttc
tctttgaccagtcctgatgacattgcagaggtattgtttttggagttgaaattgccacca
aatggagacgtgaaaatacaaggaaacaagaaaacgctgggttacaccagaagagctact
gctaatggaaacagagtcaggctgggcaagcagtttagtacaaccaaggatattttagaa
aaattaaaggctttacacccattacccggcctgattttggaatggagaaggatcaccaat
gcaatgaccaaagtggtgtttccactgcagagggagaagcgtttgaatcctgcactaggg
atggagaggatctatcctgtatctcagactcacactgctacaggtcgcgtaagcttcata
gaaccgaatattcagaatgttccaaaagactttgagattgaaatgccaactgtggttgca
gagagccctccttctcaagcacgaggatgtggctctacttttcttgggaacagaggtaga
aagcgatgcagtaccttgccttgtggccttaaggttctggcttatgaaggatccaaagga
agagggatgccattttctgttagcatgaggcatgcttttgttcctttttcaggaggttta
attttggctgctgattattcccaacttgagctgaggatccttgctcacttgtctcgtgac
cgtcgtctcattgaggtcttgaacagtggggctgatgttttcaagagcattgcagctgag
tggaagatgattgaccctgaagctgttggaaatgagataaggcaacaagccaaacagatt
tgctatggtattatctatggaatgggagctaaatctttaggagaacagatgggtattgaa
gaaaatgatgctgcctgttacattgaatccttcaaatccagatacccagggattcagact
ttcctgaaggagacagtgaagaaatgcagtagggatggttttgtgcagagcatcctgggg
aggcgcagatatctgccatctatcaaagatccaaacccttacagcaaagcacatgcagag
cgccaggctgtgaacacagctgttcagggttctgcggctgacattgttaaaacagccact
gtgaacattcagaggcagcttgaagcgttcccatcagcagtgaagtcccatggacatctg
gagagcttgttccagagcaacaggacaggaaggttagacaggaggagaaacagagcgaag
ttacagagtggaggtttcttcatcctccagctccatgatgagctcctctatgaggttgca
gaagacagtgtaattcaggtagctcagattgtcaaacacgagatggaaaatgccataaaa
ctcttggtgaagttgaatgttaaagtgaaaattggacctagctggggagacctgcaggag
ctggagttgtga

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