Pelodiscus sinensis (Chinese soft-shelled turtle): 102446022
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Entry
102446022 CDS
T02980
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pss04040
]
102446022 (SCN2A)
Ion channels [BR:
pss04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102446022 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
ATP-synt_B
IQ
Neur_chan_memb
HB_ELP1
Bdbt-like_TPR
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
102446022
NCBI-ProteinID:
XP_006137387
Ensembl:
ENSPSIG00000002626
LinkDB
All DBs
Position
Unknown
AA seq
2008 aa
AA seq
DB search
MAQSVLVPPGPDSFHYFTRESLAAIEQRIAEEKAKKSKQERKDDDDENGPKPNSDLEAGK
SLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATSAVYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTLEINVISYFNSTI
GENGTFVNTTVSTFNWEEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAALAAETREFSGVGG
VGGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSEGEEKDEEEFHKSESEDSIRRKGFR
FSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDVGSENDFADDEH
STFEDNESRRGSLFVPHRHGERRNSNISQASRSSRMVPVLPANGKMHSTVDCNGVVSLVG
GPPALTSPTGQLLPEGTTTETELRKRRTSSYHVSMDFLTEPSARQRAMSIASILTNTMEE
LEESRQKCPPCWYKFANTCLIWDCCAPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMA
MEHYPMTEQFSHVLSVGNLVFTGIFTAEMFLKIIAKDPYYYFQEGWNIFDGFIVSLSLME
LGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQA
MCLIVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYV
KRKVHEFAQKAFVRKQKVLDEIKPLEDLNNKKDGCISNHTVVEIGKDLNYLKDGNGTTSG
VGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNA
SSSSEGSTVDIGLPQEGEQPEVEPEEALEPEACFTEGCVRKFKCCQVSIEDGKGKLWWNL
RKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEM
LLKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTNDERFDI
SQINNYSQCEDLIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNV
LDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSD
EMQDNLWWINLVFIVLFTGECILKLISLRYYYFTIGWNIFDFVVVILSIVGMFLADLIEK
YFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIF
GMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPNKDH
PGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEM
FYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDI
LFAFTKRVLGESGEMDTLRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAFR
RYLLKQKIKKVSCMFKQDKDKDEDDLPMKEEMIIDKLNENSTPEKTDMTPSTTSPPSYDS
VTKPDKEKYEKDKSEKEDKGKDIRESKK
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccactatttcacgagagag
tcacttgcagctattgaacaacgtattgctgaagaaaaagctaagaagtctaaacaagaa
cgtaaagatgatgatgatgaaaatggaccaaaaccaaacagtgacctggaggcgggaaag
tcactgccatttatttacggtgacatacctccaggaatggtgtccgagcccttggaggat
ctggacccatattatatcaataaaaaaacttttatagtattgaatagagggaaggcaatc
ttccgattcagtgccacctctgccgtgtacatgttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattgttcagcatgcttattatgtgcactatattg
accaactgtgtatttatgactatgagtaaccctccggattggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttataaaaattcttgcaaggggcttctgt
ttagaagattttacttttcttcgagacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcaga
gttctccgagcattgaaaacaatatcagtcattccaggcttaaagactattgtgggagcc
ctaattcagtctgtgaagaagctctcggatgtcatgatcctgactgtgttttgtctcagt
gtatttgcactaatagggctgcagctgttcatgggtaacttgaggcacaaatgcttgcag
tggcctccagacaactcaactttggaaataaatgttatttcctactttaatagcacaata
ggagaaaatggaacatttgttaatacaacagtgagcacatttaattgggaggagtacatc
gaggacagaagtcatttttactttttggaaggacaaaatgatgctctgctatgtggcaat
agctcagatgcaggtcaatgtccggaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagctttgacacattcagctgggcattcttgtcactgtttcgactg
atgactcaggacttttgggagaatctttatcagctgacactacgtgctgctggcaaaacg
tacatgatattttttgtcctggtgatttttctgggctctttctatctgattaatttgatc
ctggctgtggttgccatggcctatgaagaacaaaatcaagcaaccatggaagaagcagag
cagaaggaggcagaatttcagcagatgcttgaacagctgaaaaaacaacaagaagaagct
caggcagcagcagctgctgcactagcagctgaaacaagagagttcagtggagtaggtgga
gtaggaggattctctgaaagttcttctgaagcatcaaaattaagttcaaagagtgctaaa
gagagaaggaacagaaggaagaagagaaaacagaaagagcagtctgaaggagaggagaaa
gatgaggaagaatttcacaaatctgaatcagaagatagcatcagaaggaaaggtttccga
ttctctattgaagggaacaggctgacatatgaaaagaggttctcttctccacaccagtct
ttgctgagcattcgtggctccctgttctccccaagacgtagtagcagaacaagtcttttc
agcttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgccgatgatgaacac
agcacttttgaagacaatgagagtagaagaggttctctctttgttcctcacagacatggt
gaacggcgcaacagtaacattagtcaggctagtaggtcatccaggatggtaccagttctt
ccagcaaatgggaagatgcacagcactgtagattgcaatggagttgtttctttggttgga
ggacctccagctctcacgtcacctactggacagcttctcccagagggcaccacaacagaa
acggaattaagaaagagacggacaagttcttaccatgtttctatggatttcctgacagag
cccagtgcaaggcaaagagcaatgagtatagccagcatactcacaaacacaatggaagaa
cttgaagaatccaggcagaagtgcccaccatgctggtataaatttgcgaacacatgcttg
atctgggattgctgtgctccatggttaaaagtaaaacatattgtaaatttaattgtgatg
gatccatttgtcgatcttgctattactatctgcattgttttaaatacattatttatggcc
atggagcattatccaatgacggaacagtttagtcacgtgctttcagtaggaaatctggtc
tttactgggatcttcacagcggaaatgtttctcaagataattgccaaggatccttattat
tattttcaagaaggctggaatatttttgatggtttcattgtgagccttagtttaatggag
cttggtcttgcaaatgtagaaggattatctgttcttagatcattcagattgcttcgagtt
ttcaaattggcaaagtcttggcccacactaaatatgctgataaagattattggtaactca
gtgggggctttaggaaatttgaccttggtgctggccatcattgtcttcatttttgctgtg
gttggtatgcaactgtttggcaaaagctacaaggaatgtgtttgcaagatctccaatgac
tgtgaacttccacgctggcacatgcatgacttcttccactctttcttgattgtattccga
gtgttgtgtggagaatggatagagactatgtgggactgtatggaggttgcagggcaagcc
atgtgccttattgttttcatgatggtcatggtgattggaaacctagtggtactcaacctc
tttctggccttgctgctgagctcatttagttcggacaaccttgcggctacagatgatgat
aatgaaatgaacaatctccaaattgcagtggcaaggattcagaagggaatagattatgta
aaaagaaaagtacatgaattcgcccaaaaagcttttgttagaaagcaaaaagttttagat
gaaatcaagcctcttgaagatctaaacaacaaaaaagacggctgcatttccaatcatact
gttgtagaaataggtaaagaccttaactatcttaaagatgggaatggaactaccagtggt
gtaggcagcagcgtggaaaaatatgtcgtcgatgaaagtgattacatgtcattcataaac
aatccaagtctcactgtgactgtgccgattgctgttggggaatcagattttgaaaattta
aatacagaagagtttagcagcgagtcagatctagaggagagcaaagagaagttaaatgca
tccagctcatctgaaggcagtacagttgatattggacttcctcaagaaggagaacaacca
gaggtagaacctgaagaagctcttgaaccagaagcctgttttacagaaggctgtgtacgg
aagttcaagtgctgtcaagtcagcatagaagatgggaaaggaaaactatggtggaatctt
aggaaaacctgctacaagatagttgaacacaactggtttgagaccttcattgtcttcatg
attctcctcagcagtggcgctctggcttttgaagacatatacattgaacagcgcaagact
attaaaaccatgctggaatatgccgataaagtcttcacttatatcttcattctggaaatg
cttttaaaatgggtggcttatggttttcaaatgtatttcactaatgcctggtgctggctg
gacttcctgattgttgatgtctctttggttagcttaacagctaatgccttgggctactca
gaacttggtgcgattaaatcccttaggaccttaagagctttgagacctctaagagccttg
tcacgatttgaagggatgagggtcgttgtgaatgccctcttaggagcaattccatccatt
atgaatgtgcttcttgtttgtcttatattctggctaatcttcagcatcatgggagtaaat
ctgtttgctggcaaattctattactgtattaataccacaaatgatgagaggtttgatatc
agccaaatcaacaattacagtcaatgtgaggacctcataaaaaacaatgaaactgcccga
tggaaaaatgttaaagtaaactttgataacgtaggacttggctatctttctctgcttcaa
gtagccacatttaaaggatggatggatataatgtatgcagccgtggattctcgaaatgta
ttggatcagcctaagtatgaagacaacctgtatatgtatctttactttgtcatctttatc
atctttggatcattcttcaccctgaaccttttcattggtgtcatcatagataatttcaac
caacaaaaaaagaagtttggaggccaagacatctttatgacagaagaacaaaagaaatat
tacaatgcaatgaaaaagttgggttccaagaaaccacaaaaacctatacctcggccagcg
aacaaattccaaggcatggtctttgattttgtgacaaaacaagtatttgacatcagcatc
atgattcttatctgccttaacatggtcaccatgatggtagaaacagacgaccagagtgat
gagatgcaagataatttatggtggattaaccttgtgttcattgtccttttcactggagaa
tgtattttgaaactgatttcactccgttattactacttcaccatagggtggaacattttt
gattttgtagttgtcattctctccatagtaggtatgtttctggctgacctgattgaaaaa
tattttgtgtcccccaccttgttcagagttatccgacttgccagaataggacgaatcctg
cgtctcattaagggtgcaaaagggatccgcactctgctttttgctttgatgatgtctctt
cctgctttgtttaacattggtctcctgctttttctggtcatgtttatctatgctatattt
ggaatgtccaactttgcctatgttaagagggaagttgggattgatgacatgttcaacttt
gaaacttttggaaatagcatgatctgcttatttcaaattaccacgtcagctggttgggat
ggcttgttagcaccaattcttaacagtggagaaccagactgtgaccctaataaagatcac
ccaggaagctctgttaaaggagactgtggtaacccttcagttgggattttcttttttgtc
agttatattatcatatcatttttagttgtagtaaacatgtatattgctgttattttggag
aacttcagtgtcgccacagaagaaagtgctgagcccttgagcgaggacgactttgagatg
ttctatgaggtttgggaaaagtttgatccagatgcaactcagttcatagaattcagtaaa
ctctctgattttgcagcttcattggatcctcctcttcttatagcaaaaccaaataaagtt
cagcttattgcaatggatctgcccatggtgagtggggacagaattcactgccttgacatc
ttgtttgcttttacaaagcgtgttttgggggaaagtggagaaatggatacacttcgaata
caaatggaagatcggtttatggcagccaacccttctaaagtctcctatgaaccgatcaca
acaacattaaaacgaaaacaagaggaagtatctgctgtcattattcagcgtgctttcaga
cgttaccttttaaagcaaaaaattaaaaaagtttcatgtatgtttaaacaagataaagac
aaagatgaggatgacctgcctatgaaagaagagatgattattgataaactgaatgagaac
tccactccagaaaaaacagatatgaccccttccacaacttctccaccttcctatgatagt
gtaacaaagccagacaaagagaaatatgaaaaagacaaatcagaaaaagaagataaaggt
aaagacatcagggaaagtaaaaagtaa
DBGET
integrated database retrieval system
