Pelodiscus sinensis (Chinese soft-shelled turtle): 102448114
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Entry
102448114 CDS
T02980
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102448114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102448114
Spliceosome [BR:
pss03041
]
Complex A
U1 snRNP components
U1 related factors
102448114
Complex B
102448114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
102448114
NCBI-ProteinID:
XP_025044474
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MALQFINPVLPVKHGQPAPPDRLRRVMPCGPQPPLGFLGPPHPTASVCPVIAPSCQLQAL
LPDEPLSNRPLPVPRLPHPFPGGAAHSSLCLCGEAAHSRWSAPDSSSGPAGQPAPFPTAP
PMMPPPFLPPPGIPPPFPPMGLPPIGPRPPAMPPMPPGMMPPLLPPMAGPPPIGQMPPMV
PPMMPGMLIPGVPSGPVPAVAAPVTDPIGAAPAQPAPTLPNPMVAPVQHSLMGSGSPAQD
APRKKPPWSEHRAPDGRIYYYNCNSKQSTWEKPDELKSKAELLISQCPWREYKSDTGKSY
YYNSQSKESRWTKPRDLDELEALIDEEEAGKQQETPSAASSPSLSSSASTDTEAPGGEEH
TPVLGATMEGLEEVALQQEEVTSSADPGRCEEEETGAGERSAFNWSTKEEAKLAFKELLK
DKGVPSNTSWELAMKMIVDDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLKAKEAKE
ELQRFLEQHERMSSITRYRKAEQMFGEQEVWAIVPERDRKEIYDDVLFFLAKKEKEHTKQ
LRKRNIQALKNILDSMSNVSFQTTWSEAQQYLMDNPTFAEDEDLQNMDKEDALICFEEHI
RTLEKEEEEEKEKTRLRERRQQRKNREAFQVAAPWGLEGGDGLICLGLGSVEQDGLGPLC
SGSTPLDLFKFYVEDLKARFHDEKKIIKDILKDRGFSVEVKTTFEDFAHVISFDKRAATL
DAGNIKLTFNSLLEKAEAREREREKEEARKLRRREAAFKSMLKQAAPPLEPGRAVGLCPQ
NECQHYHAKAKKHTKRGRKHHRKRSQSGSESELESHHQRAQKRRKRNHSESGSELSSSPD
SDLSSRKSRKQKKKSKKKRHKSNSPQNEGKEKGRKGKEKEKEPERAEGRRRSPQRSLKRE
KVKGVPGGRGAGCGGQELERALLAPGRRHFGRRPQGRGWLDAPRAWRRGWRVLVTGMAVG
RVLLRGVARPSALLLGRCSYSGN
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcagtttatcaaccctgtccttccagtgaaacatggacagccagccccacct
gacaggctgcgccgggtgatgccatgtgggcctcagcctcccttggggttccttggccct
ccccatcccacagcctcagtgtgccctgtgatcgcaccctcctgccaactccaggctctc
ttgcctgatgagcccttatctaacaggcctctgcctgtccccagactcccccacccattc
ccaggaggggcagcccactcatccctgtgcctctgtggtgaggcagctcacagcaggtgg
tcggctccggactccagcagcggccctgcagggcagccggccccatttcccaccgcccca
cccatgatgcctccgccctttctgcctcctcctggaatcccccctcccttcccccccatg
ggactccctcccatcgggccgagaccgccagcgatgcctcctatgccccctggcatgatg
ccacctctgctcccgcccatggcagggccccctcccataggacagatgccgcccatggtg
cctcccatgatgccagggatgctgataccaggggtgccctctggtcctgtccctgcagtg
gcggctcctgtgacagacccaattggcgctgctccggcccaaccggcacccacactcccg
aatcccatggtggcccccgtccagcatagcctgatgggcagtggttccccagcgcaggat
gccccccgcaagaagcccccctggagcgagcacagggccccagacggacgcatttactat
tacaattgcaactccaagcagtccacctgggagaagccggatgagctgaagtccaaagca
gagctgctgatatcccagtgcccctggagggagtacaagtccgacacgggcaaatcttac
tactacaactcccagagcaaagagtcgcgctggaccaagccgcgggacctggacgagctg
gaggcgctcatcgacgaggaggaggcagggaagcagcaggagaccccatcagcagcctcc
agccccagcctgtcctcgtccgccagcacggacacggaggcgccgggcggggaggagcac
acgcctgtgctgggggccacaatggaaggcctggaggaggtggccctgcagcaggaggaa
gtgaccagcagtgctgaccccggccggtgtgaggaggaggagacgggggccggggagagg
agcgccttcaactggagcaccaaggaggaggccaagctggcctttaaggagctgctgaag
gacaagggcgtcccctccaacacgtcgtgggagctggctatgaagatgattgtggatgat
ccgcggtacagcgccctgcccaagctgagcgagaagaagcaggccttcaatgcctacaag
gcccagcgggagaaggaagagaaggaggaggctcggctgaaggccaaggaggccaaagag
gagctgcagcgctttctggagcagcacgagcgcatgagctccatcacccgctacaggaaa
gccgagcagatgttcggggagcaggaggtgtgggccatagtcccagagcgtgaccgcaag
gagatctacgacgatgtgctcttcttcctggccaagaaagagaaggaacacaccaagcag
ctgcgcaagcggaacatccaggccctgaagaacatcctggacagcatgagcaatgtcagc
ttccagaccacctggtccgaggcccagcagtacctgatggacaaccccacctttgccgag
gatgaggacttgcagaacatggacaaggaggatgccctgatctgcttcgaggagcacatc
cgcacgctggagaaggaggaggaggaggagaaggagaagacgaggctgcgtgagagacgc
cagcagcgcaagaacagggaggccttccaggtagcggcgccctggggcctggaagggggg
gatggcttgatttgcctgggcctgggctcggtggagcaggatggcctgggacccctctgc
tcaggctccacccccctggacttgtttaaattctacgtggaggatctcaaggctcgtttc
catgacgagaagaagatcatcaaggacatcttaaaggatcgcggcttcagcgtggaggtg
aagacgaccttcgaggacttcgcccacgtcatcagctttgacaagagggcggccacgctg
gacgcaggcaacatcaagctgaccttcaacagcctgctggagaaggccgaggcgcgggag
cgggagcgggagaaggaggaagcgcgcaaactgcgtcgccgcgaagcagccttcaagagc
atgctgaagcaggccgccccgcccctggagcccgggcgggccgtgggtctgtgcccgcag
aacgagtgccagcactaccacgccaaagccaagaaacacaccaagagaggcaggaaacac
catcggaagcgctcgcagtcgggctcagagtcggagctggagtcccaccaccagcgggcc
cagaagcggaggaagcggaatcactcggagtccggctcagagctctcctcctcgcccgac
tcagatctcagctcccgcaagtcccggaagcagaagaagaaaagcaagaagaagaggcac
aaatcgaacagtccccagaacgaagggaaggagaaaggcaggaaggggaaggagaaggag
aaggagccagagcgggcagagggccgacggcgttccccccaacgcagcctcaagagggag
aaggtaaagggggtgccggggggcagaggtgctggctgtggagggcaagagctagagagg
gctttgctggccccaggacgccggcactttggacggcggccgcagggccggggctggctg
gatgcgcccagggcctggcgccgaggctggcgggtgctggtcacagggatggccgtgggg
cgtgtgctgctgaggggcgtggccaggcccagcgcattgttactggggcgctgctcgtac
tctgggaattaa
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