Pelodiscus sinensis (Chinese soft-shelled turtle): 102460182
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Entry
102460182 CDS
T02980
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like
KO
K12015
tripartite motif-containing protein 39 [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102460182
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102460182
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102460182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
PFam54_60
DUF5447
DASH_Dad4
MRB1590_C
Motif
Other DBs
NCBI-GeneID:
102460182
NCBI-ProteinID:
XP_025038667
Ensembl:
ENSPSIG00000010099
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MPGLPLPSAERCPVAAVQTGCWEELARASPCPVCRKTFRHRTLKPNRQLGNMVEIAKQLQ
VTKRKVRDESLCGKHNEALNLFCKEDQQAVCLVCEISHDHRSHTVVPLDDASLEYKEKLQ
QCLEPXAHCKSQEEKKPGELKRKVESRRQLIMSEFEELHQFLEEEQRVLPQRLEEEEKEI
LQRLKDNVAQLSDQRLSLNQLITEIEEKCLQSGIEMLQDIKSTLERCETMRTMKLASVPI
ELEKNFCSFPRQYFVLRKIIKRLIGDVTLDPDTAHPNLVLSEDRKSVKFVDTRLRDLPDT
PRRFTVYPCVLATEGFTSGRHYWGVAXVCKDSVSRKGELMALPETGYWRVRLWNGDKYAA
TTTPFTPLHLPVKPKRVGVFLDYEAGRVSFYNVTDRSHIYTFTDTFTEKIWPLFYPGIRA
GRKNAAPLVIRTPTDWE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccggggctgcccctgccctcggcggagcgctgcccggtggcggccgtgcagaccggc
tgctgggaggagctggcccgggcctccccctgccccgtctgccgcaagaccttccgccac
cgcaccctcaagcccaaccggcagctgggcaacatggtggagatcgccaagcagctgcag
gtcaccaagcgcaaggtgcgggacgagagcctgtgcgggaagcacaacgaggcgctcaac
ctcttctgcaaggaggaccagcaggccgtctgcctggtgtgcgagatctcccacgaccac
cgctcccacaccgtggtgcccctggacgacgcctccctggagtacaaggagaagctgcag
cagtgtctggagcccncggctcactgcaagtcccaggaggagaagaaacctggagagctg
aagaggaaggtggagagccgtcggcagctgatcatgagcgagttcgaggagctgcaccag
ttcctggaggaggagcagcgggtgctgccccagcggctggaggaggaggagaaggagatc
ctgcagcggctgaaggacaacgtggcccagctgtcagaccagcgcctctccctcaaccaa
ctcatcaccgagatcgaggagaagtgcctgcagtcgggcatcgagatgctccaggacata
aagagcactctggaaaggtgcgagacgatgcggaccatgaaactggcctcggtccccatt
gagctggagaagaatttctgtagcttcccccggcagtactttgtcctgcgcaagatcatc
aagagactgatcggggacgtgaccctggaccccgacacggcccaccccaacctggtgctg
tccgaggaccgcaagagcgtgaagttcgtggacacacggctgcgggacctgcccgacacc
ccccggcgcttcactgtctacccctgcgtcctggcgaccgagggcttcacctcaggccgc
cactactggggggtggcgnnggtctgcaaggactcggtgagccgcaagggtgagctgatg
gccctgcccgagacgggctattggcgggtacgactgtggaacggcgacaagtacgcggcc
accaccacccccttcaccccactgcacctccccgtcaagcccaagcgggtgggcgtcttc
ctggactacgaggccgggcgggtgtccttctacaacgtgaccgaccgctcccacatctac
accttcacggacacgttcaccgagaagatctggcccctcttctacccgggcatccgcgcc
gggcgcaaaaacgccgccccgctcgtcatccgcacccccacggactgggagtga
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