Pseudomonas sp. SXM-1: DCC84_28370
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Entry
DCC84_28370 CDS
T11095
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx01501
beta-Lactam resistance
pssx02024
Quorum sensing
Module
pssx_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCC84_28370
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DCC84_28370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_28370
01504 Antimicrobial resistance genes [BR:
pssx01504
]
DCC84_28370
Transporters [BR:
pssx02000
]
Other transporters
Pores ion channels [TC:
1
]
DCC84_28370
Antimicrobial resistance genes [BR:
pssx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DCC84_28370
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DCC84_28370
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DCC84_28370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QBQ13411
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All DBs
Position
complement(6008131..6009642)
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AA seq
503 aa
AA seq
DB search
MPRRISRELKTLSVWALSLAISGCIGTGGIAPQGQSLVASSLATDEAIKSAAQDAHWPTA
QWWQAYGDPQLNHWIDLAVQGSPSMAMAAARVREARAMAGIAESAESLQVNGDATLKRHN
WPSDQFYGPGALDNSTTWDNNASLGLSYALDLWGRESNATERAVDMAHMSAAEARQAQLE
LQNNVVRAYIQLSLHFAQRDIVAATLAQQQQILDLAQKRLNGGIGTHFEVSQAETPLPET
HRQLDALDEQIALSRNQLAALAGKGPGAGAQLQRPTLSLAAPLKLPSSLPAELLGQRPDV
VASRWQVAAQARGIDVAHAGFYPNVDLVGSLGYVATGGGMLSFLTGKKLNYTAGPAISLP
IFDGGRLRSQLGEASAGYDIAVAHYNQTLVNALKGISDQLIRRESMDKQQAFAAESVASA
QKTYDIAMIAYQRGLTDYLNVLNAQSLLFRQQQVQQQVQAARLSAHAELVTALGGGLGAG
SDVPQDSQTLPSKTPAALAVFDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcagcagagagctgaagactctcagtgtttgggccttatcgttagca
atcagcggctgcatcggaaccggaggaatcgcccctcaaggccagtcactcgtcgccagt
tcattggccaccgacgaggcgatcaaaagcgccgcccaggacgcccactggcccaccgcg
caatggtggcaagcctacggcgacccgcaactcaaccactggatcgacctcgccgtgcaa
ggcagcccgagcatggccatggccgctgcacgtgtgcgtgaagcccgggccatggccggg
atcgccgagtcggccgagtcgttgcaggtcaatggtgacgccacgctcaagcgccataac
tggccgagcgaccaattctacggcccgggcgcgctggacaattccaccacctgggacaac
aacgcgtccctgggcttgagctatgccctcgacctctggggccgcgaaagcaacgccacc
gagcgcgccgtggacatggcccacatgagcgccgccgaagcgcgccaggcgcagctcgaa
ttgcagaacaacgtggtgcgcgcctatatccagctgtcgttgcacttcgcccagcgcgat
atcgtggccgccaccctggcccagcaacaacagattctcgacctggcgcaaaagcgtttg
aatggtgggatcggcacccacttcgaagtcagccaggctgagacgccgctgccggaaacc
catcgccagctggacgccctggatgaacagatcgccctgagtcgcaaccagttggccgcg
ctggcgggcaaagggccgggggcgggcgcgcagttgcagcggcccaccttgtccctggcc
gcgccgctgaaactgccgtcgagcttgccggccgaactgctcggccagcgcccggacgtg
gtcgccagccgctggcaagtggcggcccaggcccgtggcattgatgtggcccacgccggt
ttctaccccaacgtcgacctggtgggcagcctcggctacgtcgccaccggcggcggaatg
ctcagtttcctcacgggtaaaaagctcaactacaccgccggcccggccatcagcctgccg
atctttgacggcggccgcctgcgctcgcagttgggggaggccagcgccggctacgacatc
gccgtcgcgcactacaaccagaccctggtcaacgcgctcaagggcatcagcgaccagttg
atccgccgcgagtcgatggacaagcagcaagccttcgccgccgaatccgtggcctcggcg
cagaaaacctatgacatcgcgatgatcgcctaccagcgcggcctcaccgactacctcaac
gtgctgaatgcccagagcctgttgttccgccagcagcaggtgcagcagcaggtccaggct
gcacgcctgagtgcccacgccgaactggtgaccgcgttgggcggtggcctcggtgccggc
agcgatgtgcctcaggacagccagaccttaccgagcaagaccccggcggccctcgccgtg
tttgatcactga
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