Pseudomonas syringae pv. tomato DC3000: PSPTO_1842
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Entry
PSPTO_1842 CDS
T00118
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSPTO_1842 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pst01007
]
PSPTO_1842 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pst03016
]
PSPTO_1842 (alaS)
Enzymes [BR:
pst01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
PSPTO_1842 (alaS)
Amino acid related enzymes [BR:
pst01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PSPTO_1842 (alaS)
Transfer RNA biogenesis [BR:
pst03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSPTO_1842 (alaS)
Prokaryotic type
PSPTO_1842 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DUF1319
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
AAO55361
UniProt:
Q885J0
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All DBs
Position
2010440..2013064
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AA seq
874 aa
AA seq
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MKSAEIREAFLGFFEEQGHTRVPSSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRA
VTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEKWLN
LPKEKLWVTVYATDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPC
SEIFFDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLE
RVSAVLQHVHSNYEIDLFQSLLTASANAIGCSNDNQASLKVVADHIRSCGFLIADGVLPS
SEGRGYVLRRIIRRACRHGNKLGAKGSFFYQIVAALVAEMGSAFPELVQQQSHIERVLRG
EEEQFAKTLEQGLKIIEQDLAELKGTVVPGEIVFKLYDTYGFPMDLTGDIARERNLTLDE
EGFEREMEAQRVRARSASSFGMDYNSLVKVDVATQFTGYSATTGSASVVALYKDGQSVTH
LNAGEEGVVILDTTPFYAESGGQIGDSGFLLAGDARFDVSDTTKTGGAFLHHGVVASGSL
SVGVQVETQVADEVRDATKLNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFE
SIKPEQLRALEDIVNAEIRKNTPVVTEETDIDTAKKKGAMALFGEKYGDSVRVLSMGGEF
SVELCGGIHASRTGDISLFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEAATLV
KGNRDNLLDKLTAVLERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLDGQ
DGKALLALVDQLKNKLGRAVILLGSVHEDKVVLVAGVTKDLTGQLKAGDLMKQAATAVGG
KGGGRPDMAQGGGVDATALDSALALAVPFVEQGI
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgcagaaatccgtgaagccttccttggcttcttcgaagagcaaggccacacc
cgtgtcccttcaagctccttgattccgggcaatgacccaaccctgctgttcaccaacgca
ggcatgaaccagttcaaggattgcttcctgggccaggaaaaacgcgcctacacccgcgcc
gtgaccagtcagaaatgcgtgcgtgccggtggcaagcacaacgacctggaaaacgtcggc
tataccgctcgtcaccacacttttttcgaaatgctgggtaacttcagctttggtgactat
ttcaagcgtgatgccattacctacgcctggaccttcctgacttccgagaagtggctgaac
ctgcccaaggaaaaactctgggtcaccgtctacgcgaccgacgacgaagcctacgatatc
tggaccaaagagatcggcgtcccggccgaacgcatggttcgcatcggtgacaacaaaggc
gcgccttacgcctccgacaacttctggaccatgggcgacaccggcccgtgtggcccgtgc
agcgagattttcttcgaccacggcgcggacatctggggtggcccgccaggctcgccggaa
gaggacggcgaccgttacattgaaatctggaacaacgtttttatgcagttcaaccgtacc
gctgatggcgtgctgcacccgctgccagcgccgtcggtcgataccggcatgggtcttgag
cgggtcagtgccgttctgcagcacgtgcattccaactacgaaatcgacctgtttcagagc
ctgcttaccgcatcggccaatgccatcggttgcagcaacgacaaccaggcttcgctgaaa
gtcgtggctgaccacattcgttcttgcggcttcctgatcgccgatggcgtactgccttcc
agcgaaggccgtggctatgtgctgcgccgcatcattcgtcgcgcctgccgtcacggtaac
aagctcggtgccaagggcagcttcttctaccagatcgtcgccgcgctggtcgccgagatg
ggttcggcattccctgaactggtgcaacagcagtcgcacatcgagcgcgtcctcagaggc
gaagaagagcagttcgccaagactctggaacaaggcttgaagatcatcgagcaggatctg
gccgagctcaaaggcaccgtggttcccggcgaaatcgtgttcaagttgtatgacacctac
ggtttcccgatggacctgacaggtgacatcgcccgtgagcgtaacctgacgctggacgaa
gagggctttgagcgcgaaatggaagcccagcgcgtgcgtgcacgttcggccagctcgttc
ggcatggactacaacagtctggtcaaggtcgatgtggccacccaattcaccggttactcg
gcgaccaccggcagcgccagcgtcgttgccctctataaagacgggcagtcggtgactcat
ctgaacgcaggcgaagagggcgtggtgattctcgacaccaccccgttctatgccgaatca
ggtggccagatcggcgacagcggcttcctgctggctggtgatgcgcgcttcgacgtcagt
gacaccaccaagaccggcggggcattcctgcaccacggtgttgtggcgtccggcagcctg
agcgtcggcgtacaggttgaaacacaggtggccgatgaagttcgtgatgcaaccaaactg
aaccattcggccactcacttgctgcacgccgcattgcgtcaagtgctgggcgagcacgtg
cagcagaagggctcgctggtcgacagtcagcgtctacgctttgacttcagccacttcgag
tcgatcaagcctgagcaactgcgtgcactggaagacatcgtcaacgccgaaattcgcaag
aacacgccggtggtcaccgaagaaaccgacatcgacaccgcgaaaaagaaaggcgccatg
gcgctgttcggcgagaagtacggtgacagcgttcgtgtgctgagcatgggcggcgagttc
tccgtcgagctgtgcggcggtattcacgccagccgcaccggtgacatctcgttgttcaag
attgtcagtgaaggcggcgttgccgcaggcgtgcgccgtatcgaagcggtgaccggcgcg
gctgcgctggcctggctgaactcggctgaagatcaactcaaggaagccgcgacgctggtc
aaaggcaatcgcgacaacctgctggacaagctgacggcggtgcttgagcgcaaccgtctg
ctggaaaaacaactggaacaactgcaagccaaggcagccagcgccgccggtgacgacctg
tcgtcggccgcgctggatgtcaaaggggtcaaggttctggctacgcgcctggatggccag
gacggcaaggcgctgttggcgcttgtcgaccagttgaagaacaagctcggccgcgcagtg
atcctgctcggcagtgttcatgaagacaaggttgtcttggtcgcaggcgtgaccaaggac
ctgactggccaactcaaagccggtgatttgatgaaacaggcggcaaccgcagtaggcggt
aaaggcggtggtcgtcctgatatggctcaaggcggtggtgtcgatgcaactgcgctggat
tcagcgctggcactggccgttccttttgtagagcagggtatctga
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