Paracoccus stylophorae: JHW45_15220
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Entry
JHW45_15220 CDS
T08951
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pstl
Paracoccus stylophorae
Pathway
pstl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JHW45_15220 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstl03021
]
JHW45_15220 (rpoB)
03400 DNA repair and recombination proteins [BR:
pstl03400
]
JHW45_15220 (rpoB)
Enzymes [BR:
pstl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JHW45_15220 (rpoB)
Transcription machinery [BR:
pstl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JHW45_15220 (rpoB)
DNA repair and recombination proteins [BR:
pstl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JHW45_15220 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WCR10392
UniProt:
A0ABY7SVH4
LinkDB
All DBs
Position
complement(3092723..3096868)
Genome browser
AA seq
1381 aa
AA seq
DB search
MAQSYVGQKRIRRYYGNIREVLEMPNLIEVQKSSYDLFLNSGEGTDHHDGEGIQGVFQSV
FPIRDFNETATLEFVKYDLERPKYDVEECQQRDMTYAAPLKVTLRLIVFDVDENTGAKSV
KDIKEQDVFMGDMPLMTQNGTFIVNGTERVVVSQMHRSPGVFFDHDRGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDLVFARIDRRRKLPVTTLLYSLGMDQEGIMDAFYETVDYTLRK
DGRNQGWVTRFFPDRVRGTRPAFDLVNADTGEVITKAGDKVTPRLVKQLQESGEQVNLLV
PFERIIGRFVAKDIINEETGLIYAEAGDEITAEYDKEGDLSGGLLKVLLDNDVTEIPVLD
IDHVNVGPYIRNTMAADKNMNREQALMDIYRVMRPGEPPTVEAASNLFNSLFFDSERYDL
SAVGRVKMNMRLDLNAPDTQRTLRPEDIVACVRGLVELRDGKGEIDDIDHLGNRRVRSVG
ELMENQYRIGLLRMERAIRERMSGVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQ
TNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLAT
FARVNKYGFIETPYRKVVDGQVTDDVVYMSATEEMRHTVAQANATLDEDGNFVDELISTR
QSGDFMLNPVDAVDLIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIRAEA
PFVGTGMEAVVARDSGAAITARRGGVIDQVDAQRIVVRATENLEAGGAGVDIYRLRKFKR
SNQSSTINQRPLVKVGEKVEAAQVIADGPSTDQGELAIGRNVVVAFMPWNGYNYEDSILI
SERIHRDDVFTSIHIDEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVG
PGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRHG
VDKDERALQIEREEVERLARDRDDEQAILDRNIYSRLKSLILGKTAVKGPKGVKANTQIT
EDLLGTLSRGQWWQLAVGDEETAKEAEALNHQYDAQKKALEARFEDKVEKVRQGDDLPPG
VMKMVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPMEDMPFLADGTPVDLVLNPLGVPS
RMNVGQILETHMGWASRGLGIRIDEALEEYRRNGDMTPVREAMKIGYGDELYADTFEGMD
DSTLVEHANTVRTGVPVATPVFDGAKEADVNDALARAGFDTSGQSVVFDGRTGEQFTRKV
TVGMKYVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAY
TLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEEE
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatcctatgtcggccagaagcgtatccggcgctattacggcaacatccgcgaa
gttctggagatgccgaacctgatcgaggttcagaaatcctcgtacgacctgttcctgaat
tcgggcgaaggcaccgaccatcacgatggcgagggtattcagggcgtcttccagtcggtc
tttccgatcagggatttcaacgagaccgcgacgctggaattcgtcaaatacgatctggaa
cgcccgaaatacgatgtcgaggaatgtcagcagcgcgacatgacctatgccgcgccgctg
aaggtgacgctgcgtctgatcgtgttcgacgtcgatgagaataccggcgcgaaatcggtc
aaggacatcaaggaacaggacgtcttcatgggcgacatgcccctgatgacccagaacggg
acgttcatcgtgaacgggaccgaacgcgtcgtcgtgtcgcagatgcatcgcagccccggc
gtgttcttcgaccatgaccgcggcaagacccattcctcgggcaagctgctgttcgcctgc
cgcatcatcccctatcgcgggtcgtggctggatttcgaattcgacgccaaggatctggtc
ttcgcccgcatcgaccgccgccggaaactgccggtgacgacgctgctgtattcgttgggc
atggatcaggaaggcatcatggacgccttctacgagaccgtggattacacgctgcgcaag
gacggccgcaatcagggctgggtcacgcggttcttccccgatcgcgtgcgcggcacccgt
ccggcgttcgatctggtgaacgccgataccggcgaggtcatcaccaaggccggcgacaag
gtgacgccgcgtctggtcaagcagttgcaggaatcgggcgagcaggtgaacctgctggtt
ccgttcgaacgcatcatcggccgctttgtcgccaaggacatcatcaacgaggaaaccggg
ctgatctatgccgaggcgggcgacgagatcaccgccgaatacgacaaggaaggcgatctg
tcgggcggcctgctgaaggtgctgctggacaacgacgtgaccgagatcccggtgctggac
atcgaccacgtcaatgtcggcccctatatccgcaacaccatggccgcggacaagaacatg
aaccgcgaacaggcgctgatggatatctatcgcgtcatgcgcccgggcgagccgcccacc
gtcgaggctgcctcgaacctgttcaacagcctgttcttcgacagcgagcgttacgatctg
tccgccgtcggccgggtcaagatgaacatgcgtctggatctgaacgcgcccgacacccaa
cgcaccctgcgccccgaggatatcgtggcctgtgtgcgcggtctggtggaactgcgcgac
ggcaagggcgagatcgacgatatcgaccatctgggcaatcgccgcgtccgcagcgtcggc
gagctgatggaaaaccagtatcgcatcggcctgctgcgcatggagcgcgcgatccgcgag
cgcatgtccggggtcgagatcgacaccgtcatgccgcaggacctgatcaacgccaagccg
gccgcggccgcggtgcgcgaattcttcggttcgtcgcagctgtcgcagttcatggaccag
accaacccgctgtccgaggtgacgcacaagcggcgcctgtcggcgcttgggccgggcggt
ctgacgcgcgaacgcgcgggcttcgaggtgcgtgacgtgcatccgacccattatggccgg
atgtgcccgatcgaaacgccggaaggccagaatatcggcctgatcaacagccttgcgacc
tttgcgcgggtcaacaagtacggctttatcgagaccccctatcgcaaggtcgtcgacggt
caggtgaccgacgatgtggtctacatgtccgcgaccgaggagatgcgtcacaccgtggcg
caggccaacgcgacgctggacgaggacggcaacttcgtggacgagctgatctcgacccgc
cagtcgggcgatttcatgctgaacccggtcgatgccgtcgatctgatcgacgtgtcgccc
aagcagcttgtgtcggtcgcggcggcgctgatcccgttccttgagaacgacgacgccaac
cgcgccctgatggggtcgaacatgcagcgtcaggccgtgccgctgatccgcgccgaggcg
ccgttcgtcggaaccggcatggaggccgtcgtggcgcgcgattccggcgccgcgatcacc
gcgcggcggggcggcgtcatcgaccaggtcgatgcgcagcgtatcgtcgtgcgcgcgacc
gagaacctggaggccggcggtgcgggcgtggacatctatcgtctgcgcaagttcaagcgg
tccaaccagtcctcgaccatcaaccagcgcccgctggtcaaggtgggcgagaaggtcgag
gccgcgcaggtcatcgccgacggtccctcgaccgatcagggcgaactggccatcggccgc
aacgtggtcgtcgcgttcatgccgtggaacggctacaactacgaggactcgatcctgatc
tccgagcggattcaccgcgacgacgtgttcacctctatccatatcgacgaatacgaggtc
gccgcccgcgacaccaagctgggccccgaggagatcacccgcgacatcccgaacgtgggc
gaggaagccctgcgcaatctggatgaggccggcatcgtctatatcggcgccgaggtgggg
ccgggcgacatccttgtgggcaagatcacccccaagggcgaaagcccgatgacgcccgag
gaaaaactgctgcgcgcgatcttcggcgaaaaggcgtccgacgtccgcgacaccagcctg
cggctgccgccgggggcctacggcaccatcgtcgaggtccgggtgttcaaccgccacggc
gtggacaaggacgaacgcgccctgcagatcgaacgcgaggaagtcgagcgtctggcgcgc
gaccgcgacgacgaacaggcgatcctggaccgcaacatctattcgcgtctgaaatcgctg
atcctgggcaagaccgccgtcaaggggccgaaaggcgtcaaggccaacacccagatcacc
gaggatctgctgggcacgctgagccgtggtcagtggtggcagcttgccgtgggcgacgaa
gagaccgccaaggaagccgaggcgctgaaccatcagtatgacgcccagaagaaggcgctg
gaagcgcgcttcgaggacaaggtcgaaaaggtccgtcagggcgacgacctgccgccgggc
gtgatgaagatggtcaaggtcttcgtggccgtgaagcgcaagctgcaggcgggcgacaag
atggccgggcgtcacggcaacaagggtgtcgtgtccaaggtcgtcccgatggaggacatg
ccgttcctggccgatggcacgccggtcgatctggtgctgaacccgcttggggttccgtcg
cggatgaacgtggggcagatccttgaaacccacatgggctgggcatcgcgcggccttggc
atccgtatcgacgaggcgctggaagagtatcgccgcaacggcgacatgaccccggtgcgc
gaggcgatgaagatcggttacggcgatgagctgtatgccgacactttcgagggcatggac
gattccaccctggtcgagcacgcgaataccgtgcgcaccggcgtgccggtcgccacgccc
gtcttcgacggtgccaaggaggccgatgtcaacgacgcgctggcgcgtgcgggctttgac
acctcgggtcagtctgtcgtgttcgatggccgcacgggcgaacagttcacccgcaaggtc
acggtcgggatgaaatacgtcctgaagctgcaccatctggtcgacgacaagatgcatgcg
cgttcgaccggcccctacagcctggtgacgcagcagcccttgggcggcaaggcgcagttc
ggcggtcagcgtctgggtgagatggaggtctgggcgctggaagcctatggcgccgcctat
accctgcaagagatgctgacggtcaagtcggacgacgtcgcaggccggaccaaggtctac
gaatccatcgtcaagggcgaagacaatttcgaggccggcgtgccggaaagcttcaacgtg
ctggtcaaggaggtccggggtctgggcctcaacatggaactcctggatgcggaggaagag
gaatag
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integrated database retrieval system
