Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_015698
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Entry
Pst134EA_015698 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pst134EA_015698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_015698
Enzymes [BR:
pstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pst134EA_015698
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
Pst134EA_015698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
72028945
NCBI-ProteinID:
XP_047805448
LinkDB
All DBs
Position
8:3985100..3989204
Genome browser
AA seq
1244 aa
AA seq
DB search
MMGKRVNYAARSVISPDINIETNEIGVPPVFAKKLTFPEFVTAHNFEHMHRLVCNGPHKH
PGAVFVQDEDGTMISLDKTDEEGRRALANTLLHSSGDAENSNNTSRPDIGLPSTRTRMRS
KRVHRHLDDGDILILNRQPTLHKPSMMCHRARILKGEKTIRMHYANCNSYNADFDGDEMN
MHFPQSLVAQSEARMIANNDNQYLVPTSGNPLRGLIQDHVVSGVWMTNVDTFFNRDDYYQ
IIYGALRPEGNYSGQGRVITVPPAIWKPMPMWTGKQLISTIMKNITPSDASGLNLSSSSK
VRGKAWGSHVTEEMVLFMDGDLLQGVIDKSQIGASPYGLVHSVYDLYGAEVAGKLLGILS
RLFTKFLQHRAFTCRMDDLQLTQRGDEMRSKLISETSQRGIRATLSTIGLTEEEATTPHG
MIDLENRLQEVLRDDMKMAALDNAYSGENSSLQTAINNQCLPAGLAKPFPWNNMQMMTSS
GAKGTPVNASQISCLLGQQALEGRRVPVMVSGKTLPSFRAFETAPRAGGFVAQRFLTGIR
PQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGVRVHYDHTVRNSDSSILQFHYG
DDSLDVTKQKHLYQFDFSLLNRSSLITRFNPSRIASEVDCTTASDYTDELLQTMETGKSP
LPQPALSIYTPSRHFGSISEKFAKDVKQYQTSNPLQVLKSRKSIRKKWPVYSQSNELVSM
DLFRSLMHVRFMMGLVDPGEAVGLLAAQGVGEPSTQMTLNTFHFAGHGAANVTLGIPRLR
EIVMTASANIKTPTMKFPIRAEVSDDEFERFIKKTARLHLSQVVDEVLVTERLKKAGSSA
QIFKVYDIRLQLYPADEYCSEYSINVPNVYKAIAKVFVPTLERMINREMKTLQSDLKSQL
AEIGKGKSSSGRKGQGNAEDGSEDGGEDVPARRADEADLEDGDAYDEKRARQREEVDYDK
EGVESDSDAESEAMNDEKLRKMTGARKTRANQDSDDETSSSSSSTTDSQDARLLEEQEIS
QADADELADEVQELSSYVTSAEFDRHGGHCQLSMQFPSTAPKLLLVGLIEESCRRAVIQE
IKGISRTLITKSDDNNKERRYGMTEGANLLAAWDFGNNIIELSELYSNDINAMLKTYGVE
AARSSIIKEISGVFDVYGISVDYRHLTVIADYMTSEGRFKPFNRSGLANNVSPFLKASYE
TTATILTDATIFGDFDNLLNPSASIVLGQPPLTGTNSFDVLLKT
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcaaacgagtgaactacgccgcgagatctgtaatctcacctgatatcaacatc
gaaacaaatgagatcggagtacctccggtattcgctaaaaagctgacctttccagagttt
gtcaccgcgcacaactttgagcacatgcaccggttagtttgcaatggtccacataagcac
cctggcgcggttttcgttcaagatgaagacgggacaatgatctcattagacaaaacggac
gaggaaggtcgacgagcgttagcaaacacattgctacattcatctggtgacgccgagaat
tctaacaatacgtcaaggcctgatattggtctaccgtcaacccggacacgcatgcgcagc
aaacgcgtacatcgtcacttggacgatggtgatatcctcatcttgaatcggcaaccaacc
cttcataaaccgagtatgatgtgtcaccgagcgaggattttgaaaggcgagaagacgata
cggatgcattatgcaaactgtaactcttacaatgctgattttgatggagatgagatgaac
atgcatttccctcaaagcttggtcgcccaaagcgaggcgcgaatgatcgccaacaacgac
aatcaatatttggtaccgacctcgggtaatcctttgcgtggcttgattcaagatcacgtg
gtatctggagtttggatgacgaatgtagacacgtttttcaatcgggatgattattatcaa
attatttatggcgctctgagaccagaaggaaactactctggtcaaggtagagtcataacc
gtcccgccggctatctggaagcctatgccgatgtggactggcaaacagctcatttcgact
atcatgaaaaatatcaccccgagtgatgcatctggactcaacttgagctcttcctcaaag
gtccgaggcaaagcgtggggcagtcatgtcacagaagaaatggtgctctttatggacggt
gatctgcttcaaggagtgatcgataaatcacagatcggtgcttccccgtatggtctggta
cattccgtttacgacttgtacggcgcggaggttgctggaaagcttctgggaatcctcagt
cgactgtttaccaaatttcttcaacatcgcgcattcacttgcaggatggatgatctacag
ctcacccaacgaggggatgagatgcgctcgaagctcatttcggaaacttctcagcggggt
atccgagctacgttgtcgaccataggactaacggaagaggaagcgacaactccacacggt
atgatcgatttggaaaaccgactgcaggaggtcttgagagatgacatgaagatggcggca
ctcgacaatgcctacagcggagagaattcatcgctacaaacagctatcaataatcaatgc
cttcccgctggcctagcgaagcccttcccatggaataacatgcaaatgatgacttcatcg
ggtgcaaaaggtaccccagtcaatgcctctcaaatctcatgtttacttggtcaacaagca
cttgaaggacgccgggtacccgtgatggtcagtggcaagacacttccgtcctttcgagcg
tttgaaactgcaccacgggcgggtggatttgtcgctcaacgtttcttaactggtattcgt
cctcaagagtactactttcactgtatggctggacgagagggtttgatcgacacggccgtc
aaaactagtcgttcaggatatcttcaacgatgtctcatcaagcatcttgagggagtccga
gttcactacgatcataccgtccggaacagcgattcttcaatacttcagttccactatgga
gatgattcacttgacgtgacgaagcagaagcatctctaccaattcgacttttctctgttg
aatcgaagttcgttgatcacacgcttcaacccaagtcgaatcgcgagtgaagtggattgt
accactgcttctgactacaccgacgaactactccagacgatggagacggggaaatctcca
cttccacaacccgcgttatctatttatactccaagtcgacatttcggtagtatatcagaa
aaattcgccaaagatgtcaaacaataccaaacttcgaacccgctccaagtcctgaaatct
aggaaaagtattcgaaagaaatggcctgtttacagtcaatctaacgagctcgtatccatg
gatctcttcaggtctttgatgcatgttcgcttcatgatgggactcgtcgatccaggagag
gcggttggcttgttggccgcccagggtgttggagaaccctcgacacagatgacattgaat
actttccatttcgccggtcacggcgccgcgaatgtcactctaggtatcccacgtttacgt
gaaatcgtgatgacagcctcggcaaacatcaagacccctacgatgaaatttccgatacga
gcggaggtatcggatgatgaatttgagcgattcatcaagaaaacagcaaggctacattta
tcacaagtggtcgatgaggtattggtaacagaacgattgaagaaagctgggagcagcgcc
caaatattcaaggtctacgatatcagattgcagctctatccagctgatgaatattgcagc
gagtatagtatcaacgttccaaatgtttataaggcgatcgccaaggtctttgttcctact
ctagaacgaatgatcaaccgtgaaatgaaaacgctacaatcggatctgaaaagtcaactt
gctgagatcgggaaaggcaagtcgagttcagggcggaaaggtcaaggaaacgctgaggat
ggtagtgaggatggtggagaggatgttccagctcgaagagcggatgaggcagatcttgaa
gatggagatgcatatgatgaaaaacgagcgcgtcaaagggaagaagttgactatgataag
gagggagtcgaatcagattcagatgcggaatccgaggcaatgaatgacgaaaagctacga
aagatgacgggtgctcgtaaaactcgcgcaaatcaagatagcgacgatgagacgtcgtcc
tcgtcgtcaagtaccaccgattctcaagacgctcgacttcttgaagaacaggaaatttct
caggctgacgctgacgaacttgcagacgaggttcaagagctatcaagctatgtcacttcg
gccgagtttgataggcatggtggtcattgtcagctatcaatgcagtttccatcaactgca
cccaaattgctattggtaggattgatcgaagagagttgtagacgagcagtgatccaagaa
attaaggggatcagtcgaactttaattaccaaatctgatgataataataaagagagaaga
tatggtatgaccgaaggcgcaaacttattagccgcatgggatttcggtaacaatattatc
gagttatctgaattgtattctaacgatatcaatgctatgctcaagacttacggcgtcgag
gccgctagatcctctatcattaaagaaatctcaggcgtctttgacgtttatggtatctct
gttgattatcgacatttaacggtcattgccgactatatgacatctgaaggacgatttaaa
ccgttcaacagatcaggactagcaaacaatgtttcacctttcctaaaagcttcatatgaa
accaccgcgaccatcttgaccgacgcgaccatctttggcgatttcgataacctactcaat
ccttcagcctccatcgtcttgggccagcctccactgaccggtactaactcctttgatgtc
cttcttaaaacttga
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integrated database retrieval system
