Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_028841
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Entry
Pst134EA_028841 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_028841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_028841
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Pst134EA_028841
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Pst134EA_028841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
TFIIA
NOT1_connector
EspB_PE
MutS_II
Motif
Other DBs
NCBI-GeneID:
72035213
NCBI-ProteinID:
XP_047797944
LinkDB
All DBs
Position
17:complement(236234..245429)
Genome browser
AA seq
2460 aa
AA seq
DB search
MNTVPTPPPGLSVISAQQQRANELAKIAKTQIVFKIGGLTEENFAYAQQEIQAVVRQNPG
DTDLFYIQRLIHASVSALGFQSNHLLNNNLLLNSPTQSQLALRLLTSELKKLSRDPFTAH
KFTDALNSGLNSGGHAEDAFDLKTFVNKIHLVGLELVILLHPLVSLPNLSSGAPLPTGSL
PPGLPPPLGHNPNVLAKKRQIAKDAVQILRDSIGVALHSLSIPINPSGSGSETTTSASEE
QMPELTPIQLSKLLSIIISDTPVPFTEEGKEPELLWTPTVQRATVQAIVSRVGQELTSQI
ANHCLADAKFTSNPSPIALLYRICSDPVICSADLCKTVLIKTKRGGGPETDQVAEQLAEL
IELANKYGNEFPIDHVSWIRAIGEVYNNRIRWSEVIKLTFDQPAEQVTLPDGWGLRFLGK
VLSLAPSLAASPAEGSSPTSTTNNALQVDSSQGPPSSKGPSRSTSSQSSHPPSPTTLKNA
LPSQASTVSTAAISSLFERWTHQYTKIRLIDRLLYLPLDASPFLHALKPNPLAPMNGPSC
KKVVSAEDVSNNSPTVRVLAKSVEMSGWNVKELLCEVAKLLSPEYSFQDGQAEKDETVDK
IIEKATDIMERACKTNPELVMMALIQVPTPWAMLHNDLMARLLQSFLKGHPSHQLVFLRI
WQLDPDFLMTALRDFYHENEMNVTRVLDITQDLKLLDQVLNYQPDVNMIIDIASLASRRE
YLNLEKWLGDRIAQYGSSFINGCLDFLSKKVKHDLLRQSIVNQDASPAPAPESATLSLSA
PTVSIFIRTIRMNHELLSLEELERFKETRTQAIQLHPKLMNFMPGNEDEPGMQVSSFDSR
IEAEVDSFYKKMYDLELSIDHIILILKSMRDSPDLKNHQFLACLLSGLFDEYKFFSTYPS
KELNLTASLFGSLIREQLIGYVPLGIGVRYVLDAIRNPIESKWYEFGSMALSKFVNRLEE
WPQLALAVSEVESLKLTHPDVYLRAKTVLNGENYKDVYLSTIVGDPDEDAENNSKPKDGN
EDGEDDPRLVFSAIKSDDDLILREIRRRKKLAALDAVSGRTAEPEDPSSTRKLITSKMEF
LEPEEHTSDKILFIINNLAFNNLDTKLTEMSSQIKPEHYNWFAKYLVNHRVSIEPNNHSL
YLQFLDKLALPHMYKKINNETLIKCGLMLNSEQTLKSGSDRTILKNLASWLGSLTLAKNL
PIKHHNIAFKDLLIQGFRSNRLIIAIPFVCKVLEQSNKSKVFKPPNPWLMGILKLLIELY
HYGELKLNLKFEIEVLCKALEIELKDVKPTEVLKKQDELSQQRQEVEEVKAAARSLAAAQ
QQADQQHNHLSIENVIGRATGTLNSNSAPSAGATIPAPQPLENPGPNNLSGGSHSLSLNG
QAGYASSLQDLLKQALLELPLLMTFSTEVVLNNNILWKRVVFTSIERAIRDIIGPVVERS
VTIANISTREMILKDFAMEGKEDQMRTSAHMMVKNLAGSLALVTTKEPLRNQILVNIRTL
SIQNGIPEHNVSDEEIQQVTADNLDVACQVIEKVATDKAIIEIDNSLASAYEARRRHREH
TNSAFWDTSAMAASHYSGMLPNPLKLKLGGLEPEQLRIYEEFANVRDDNSPSDAMAVQQQ
QQQQQQSWQSQQQQQQHQHQQLQQQQQQHLQQQLQSQGPVSGLDVNRSPALAESTPNLIL
GSSENGNRPVNSISEALARINSLAGEIERLVLTITVESLAEIEENHEIRNLINEILKMLR
QANPTLKDQLTLSFAQKSVAMLYRSESKLGRDLFVNLLEEICEMTPKVAHEVSQWLIYAE
DERKYNVPVTLVLITHRIVSLGDFDAQSAKLIIRDYKPSLMNYVVEFIEACVMGSESSLI
PIGLLKHSIQALQRAIQIGRATPKVTSIMQNIQDKLPALGSAKDLGPVTIKSINDEAGLR
EQLSFCFAEWVRMYSSSYSVEKPFIEFISSLQAHGILKGEEVSSLFFRVCMEVSIDAYIK
AKASGSTAARGIFQPVDAFARLISLMIKYHTDPTGIDIERAKTHYMSKLLSIVLMVMGQF
HKELGEHFQQKPFFRFFSGLLVHINALEVHLGSCYQSVMMTLSNLIESMQPSNFPGFTTS
WMALISHRLLMPKLLMFKDREGWSTVHRLLLGHLKFLRPFLATGRLDDVGRTLYTGTVRI
FLVLLHDFPTFLSVYHHSLCSALPPHCIQLSNLILAAFPLGVRLNDPFVSGFNLESLPES
RINPTIISDFTILLDQADIRQSIDNLLNSSSSTSSTQLLTIKDRLNNKSGTELGTTYDIP
LLNSLVLYLGVQAISRVEPEKVPLYDPACTSAMIYKQLIAEIDPEGRYLLLVAAVQQLRW
TNSHTLWYSSLLIDCYMGTDSEVVKEQVARVFLERLLVQRPHPFGMIYAFIKFLGHCGTT
TNNNTSISANLNGLDHNNSVEDHLSIPSSLSSLESLKVVQKSQELKALFSICRKHVVQIN
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgttcccaccccaccccctggactatccgtgatctctgcccagcaacaacgt
gcaaacgaactagccaaaatcgcaaagactcaaatcgtcttcaagatcggtggcctgacc
gaagaaaattttgcatatgctcaacaggagatccaagccgtcgtccgacaaaatcccggt
gataccgatctattctacatccaacgtctcatccacgcctccgtctcggccctaggcttc
cagtctaaccacctactcaacaataacctcttactcaattcacccactcagtctcaactc
gcactccgattactcacatctgaactcaagaagctttcccgcgatcccttcacagctcac
aagttcaccgacgctctcaattccggcctcaactcgggtggtcatgccgaggatgcgttt
gacttgaagacctttgtcaacaagatccatctcgtcggtctcgagctcgtcatcctccta
caccctctcgtatccctaccaaacctatcctcgggcgcacctctacccactggttcccta
cccccaggtctacctccacctctcggtcacaatcccaacgtgcttgccaaaaagcgtcag
atcgctaaggatgccgtacagatactacgtgattcgatcggggtcgcccttcacagtctc
tccatccctatcaatccttcaggatctggctcggaaaccacaactagcgcctccgaagag
cagatgccagagttgacacccatacagctctccaagcttctgtcgatcatcatctccgat
accccggtcccgtttaccgaggagggcaaagaacccgaactcctgtggacacctaccgtt
cagcgcgctaccgttcaagccatcgtctccagggtcggtcaggagctcacctctcagatt
gccaaccactgtttggcagatgccaaatttacttcaaatcccagtccgattgctctactc
tatcggatctgctccgatcccgtgatttgctcggccgacctatgtaaaacggtcctgatc
aagaccaaacgaggcggcggtcccgaaactgatcaagtcgcagagcaattggccgagctg
atcgagttggccaacaagtatggtaacgaattccccatcgatcacgtcagttggattcga
gccatcggagaggtatacaataatcgaatccgttggagtgaggtcatcaaattgacattc
gatcaacccgctgagcaagtcacactccccgatggctggggactccgcttcttaggcaaa
gtgctcagtctagccccctctcttgctgcgtcacctgcagagggatccagtcccacctcc
accacgaacaatgcgctacaagtggattcatctcaaggtcctccctcatcaaaaggacca
tcccgatcaacatcctcacagtccagccaccctccttccccaactaccctcaaaaacgct
ctaccatcacaggcttctacagtctccacagcagctatatcaagtttattcgaaagatgg
actcatcaatataccaaaattcgattgatagatcgcttgctctatcttcccctcgacgct
tctcccttcttgcacgccctcaaacctaatccactggcacctatgaatggtcccagctgt
aaaaaagtcgtctcagccgaggatgtatccaataattcacctaccgtccgggtcttggcc
aagtccgtagaaatgagtggctggaatgtcaaggagctcttgtgcgaggttgccaagctg
ctttccccggagtattcatttcaagacggtcaagccgagaaggatgagacggtggataaa
atcatcgaaaaagctactgatatcatggaacgagcttgtaaaaccaacccagaactagtg
atgatggctttgatccaagtcccgacaccttgggcaatgctccataacgacctcatggcc
cgattactccagtctttcctcaaagggcacccttctcatcagcttgttttcctgcgaata
tggcagctggaccccgacttcttaatgaccgctttacgtgacttttaccatgaaaacgaa
atgaatgtcactcgtgtgctggacatcactcaagacctcaagctcctcgatcaggttcta
aactatcagcctgacgttaacatgatcatcgatattgcatctctcgccagtcgacgagaa
tatctaaacctggagaaatggcttggtgatcggattgctcaatacgggagttcatttatc
aacggctgtttagacttcttgagcaagaaggttaagcacgatctactgcggcagtccatc
gtcaatcaagatgcaagtccagcacccgctccagaatctgcgactctcagtctcagtgcc
ccgactgtgtcgattttcatccggaccattcggatgaaccacgagcttctcagcttggaa
gaattggagcgttttaaagagactcgaactcaagcgatccagctacatcccaagttgatg
aacttcatgccgggtaacgaggacgaaccgggaatgcaagtttcatcatttgattcgagg
atcgaggccgaagtcgattcattctacaagaagatgtacgatcttgaactatccatagat
cacatcatcttgattctcaagtccatgcgggactcaccggaccttaagaatcaccagttt
cttgcgtgtttgttatcaggcttgttcgacgagtacaagtttttttcgacctacccatcg
aaggagcttaacctaacggcatcactattcggttctttgatccgagagcagctgatcggt
tatgtccctcttggaatcggtgttagatatgtcttggatgctatccggaacccgatcgaa
tccaagtggtacgaatttggtagcatggctctgagcaagtttgtcaatcggttggaagaa
tggccacagctggctttggccgtgtcggaagttgaatcactcaaactgacccatcccgac
gtctaccttcgtgcaaagaccgtcttgaatggcgaaaattacaaggacgtgtacctctcc
acaattgtcggcgacccagacgaagatgccgaaaataactcgaagccaaaagatggaaac
gaggacggagaagatgatccacgattagttttctctgcgatcaaatcagacgatgatctg
atcttgcgagaaattcgtcgcaggaagaaactggccgccttagatgccgttagcggacgg
acagctgaacccgaggatccatcgagtaccaggaaactgattacttccaagatggaattt
ttagaacctgaggaacatacctcggataaaatcttgtttatcatcaacaacttggccttc
aataatctcgacacgaagttaacggagatgtcatcccaaatcaagccagaacattacaac
tggtttgcaaaatacctcgtcaatcaccgagtctcgatcgaacccaataatcattcactc
tatctccaatttctagacaagcttgcactcccccatatgtataaaaagatcaataacgaa
actctcatcaagtgtggactcatgctcaattcagagcagactctcaaatcagggtcggat
cggacgattttaaaaaatttggcatcatggctgggctccttgacgctagcgaagaacttg
ccaatcaagcatcataacattgcgttcaaagacctactgatccaaggtttcagatccaat
cgtttgattattgccatcccgtttgtatgcaaggtactcgaacagtctaataaatcgaaa
gtcttcaagcctccgaatccatggctgatgggaatcctcaagttgctcatcgaactctat
cattacggtgaactgaagttgaacctgaaattcgaaatcgaagtgctctgtaaagcctta
gagatagagttgaaggatgtgaagccgactgaggtgttgaagaaacaggatgaactaagc
caacaacgtcaagaggttgaagaagtcaaagcggcagcccgttcacttgctgctgcacaa
caacaagccgatcaacagcataaccatctctcgatcgaaaacgtgattggaagggctact
ggtactctgaactccaatagcgccccctcagctggtgcaacgatccccgcaccccaaccc
ttggagaatcctggacctaataatctatcaggtggctcacacagtctttccctcaacgga
caagcgggttatgcaagcagccttcaagatctattgaagcaggccctgcttgaattacct
ttgttaatgacattttctacagaagttgtcttgaataacaacatcctttggaagcgagtt
gttttcacctcgatcgagagagccattcgagatattattggtccagtggtcgagagatcg
gtgacgatcgctaatatttcgactcgtgagatgatcttgaaagactttgcaatggaaggc
aaagaggatcaaatgcgcacctcggcacacatgatggtcaaaaacttggcgggctctcta
gcattagtcaccactaaagaacctctgcgcaaccaaatcttagtcaacattcgcaccctt
tcaatccagaatgggattccagaacataatgtctcggacgaagagattcagcaggtgacc
gctgataatttggatgtcgcctgtcaagtgatcgaaaaggttgccactgacaaggcaatc
attgagatcgataacagtctagcatctgcttatgaagcccgtcgaagacatcgagaacat
accaacagtgcattctgggatacctccgcgatggccgcttcacattactctggaatgtta
cctaaccctctcaaactgaaattaggcggtctcgaaccagagcaactgagaatctatgaa
gaatttgcaaatgttcgggatgataacagtccctctgacgctatggctgtacaacaacaa
caacaacaacaacaacaatcatggcaatcacagcagcagcaacaacagcaccagcaccag
caattacagcagcaacagcagcagcatctccaacaacagctccaatcgcaaggccctgtc
tcaggccttgatgtgaaccgttcacctgccctggccgaaagtacgcctaacctaatcctt
ggttcatccgaaaatgggaaccgcccagtcaattcaatttcagaggctttggctcggatt
aactcactggcgggtgagatcgagagactagttctgacgatcacggtcgaaagcttagcc
gagatagaagaaaaccatgagatccgtaacttgattaacgaaatcttgaagatgcttcga
caagccaatccgacgctgaaagatcagttaacactatcgtttgcacagaaatcggtagcg
atgctgtatcgatctgagtctaaattaggcagagatctgtttgttaaccttttagaggag
atttgtgagatgacacctaaagttgctcacgaagtcagtcaatggctaatctacgccgaa
gatgagcgcaagtataatgtacccgtgacattagtgctgatcactcatcgaatcgtttca
cttggtgacttcgatgcccaatccgccaagttgatcatccgagattataaacccagtctg
atgaactacgtcgttgagtttatcgaggcttgtgttatgggatcagagtcttcgttgata
cctataggactcttgaaacattctattcaagccctccaacgggcgattcaaatcggtcgg
gcaacgccaaaggtgacttcgattatgcaaaacatacaggataagctacctgctctaggt
agtgctaaggatctaggaccggtgacgattaaatcgattaacgatgaggctggtttaaga
gagcagctcagtttttgtttcgcggaatgggttagaatgtactcgagttcgtactcagtc
gaaaaaccgtttatcgaatttattagttcattacaagcccatgggattctgaaaggagaa
gaagtctcgtcattattctttcgagtctgtatggaagttagtatcgacgcttatatcaaa
gctaaagcttcaggtagtacagccgctcgagggatctttcaacctgttgatgcttttgct
agattgatctccttaatgatcaagtatcatactgaccctactggcatcgatatcgagaga
gctaaaactcattacatgtctaagttgctctccatcgtcttgatggtcatgggccagttt
cataaagaacttggagaacattttcaacaaaaaccattttttagatttttctctggcctc
ttggttcatatcaacgctttagaagttcatctaggaagctgttatcaatcagtcatgatg
actttgagtaacctgatcgaatctatgcaaccctcaaactttccgggattcactacgtca
tggatggccttgattagtcatcgattattaatgcccaagctactaatgtttaaagatcga
gagggatggtcgacagtacatcgattgttactaggacatctaaaattccttcgaccattc
cttgcgactggaaggttagatgatgtgggaagaacgttatacacaggaacagttagaatc
ttcttagtgctcttacacgatttccctacatttttatcggtttatcatcactcattatgt
tcggctctaccaccacattgtatacaactctcaaacttaatcttggccgcttttcctttg
ggagttagattaaatgatccattcgtttctggatttaatttagaaagtttacctgaatct
agaattaatcctactatcatttcagactttactatcttattagatcaagctgatattcga
caatctattgataatctgctcaactcatcaagtagtacatcatccactcaactgctcaca
atcaaagatcgattaaacaataaatccggtacagaacttggtaccacttatgatatccct
ctccttaatagtctcgtcctttacctcggtgtacaagctatctctcgtgtcgaacctgaa
aaggtaccgttatatgacccggcttgtacttcggctatgatctataaacaattaatcgcc
gagattgatcccgaaggtcgttatttactgctagtggccgctgttcaacagttacgatgg
acgaatagtcatacactctggtattcttccctactcattgattgttacatgggcaccgat
tcagaagtggtcaaagaacaagttgctagagttttcttggaaaggttattggttcaacgt
cctcatccgttcggaatgatttacgcgtttattaagttcttggggcattgtggtactact
accaacaacaacacatcaatatcagctaatcttaatggactagatcataataatagtgtc
gaagatcatctgtctattccttcttctttgtcttcgctggaatctctcaaagtcgttcaa
aagtctcaggaattaaaggctttattctcgatttgtagaaaacatgttgtccagattaat
taa
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integrated database retrieval system
