Stutzerimonas decontaminans: UIB01_17050
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Entry
UIB01_17050 CDS
T03366
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UIB01_17050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstu03019
]
UIB01_17050
03016 Transfer RNA biogenesis [BR:
pstu03016
]
UIB01_17050
Enzymes [BR:
pstu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UIB01_17050
Messenger RNA biogenesis [BR:
pstu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UIB01_17050
Transfer RNA biogenesis [BR:
pstu03016
]
Prokaryotic type
tRNA degradation factors
UIB01_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
AHY44089
UniProt:
A0A023WWC4
LinkDB
All DBs
Position
complement(3606687..3608792)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVAVTGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAISGIPFNGPIGAARVAFHPETGYLLNPNYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIQAVTELAAEAAKPRWDWQPKAEN
TALLDAIRSEFGEAISQAYTIIIKQDRYARLGELKDQVVAKFSGEEGQPSAGEVKEAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRSVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEQALEQALEARLNILGQMNQ
VIGQSRTELSANAPTMIAMKIDQDKIRDVIGKGGATIRSICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDQRV
EKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaatttcaattcggtcagtcgaccgtaactctcgagactggc
cgtattgcccgtcaggccagtggcgccgtactggtgaccgttgatgacgacgtgaccgtg
ctggtcgcagtcaccggtgccaaaaccgctgatccgagcaagggctttttcccgctctcg
gtccactatcaggaaaaaacctacgctgccggaaaaatccctggcggcttcttcaagcgc
gaagcgcgtccttccgaaaaggaaacgctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgtttccggaaggcttccagaacgaagtccaggtcatctgcaccgtcgtatcgact
agcaagaagaccgatccggacatcgctgcgatgatcggtacttccgctgcgctggcaatt
tccggcattcccttcaatggcccgatcggcgctgcacgcgtcgctttccacccggaaacc
ggctacctgctgaacccgaactacgagcagctcaaggcttccagcctggacatggtcgta
gccggcaccaaggacgccgtgctgatggttgagtcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgtttgcccatgatgaattccaggctgtgatccaggctgtg
accgagctggctgctgaagccgccaaaccgcgttgggactggcagccgaaagcggaaaac
accgcgctgctcgatgccatccgcagcgagttcggcgaagcgatctcccaggcttacacc
atcatcatcaagcaggaccgttacgcgcgtctgggcgagctgaaagatcaggtggttgcc
aagttctctggtgaggaaggccaaccgtctgccggcgaagtcaaagaagcctttggcgaa
atcgagtaccgcaccgttcgcgaaaacatcgtcaacggcaagccgcgtatcgatggtcgt
gatacccgcactgtgcgtggcttgaatatcgaagtcggcgtactcgacaagacccacggc
tcggctctgttcacccgtggcgaaacccaggcgctggtcgtggccaccctcggtactgct
cgtgacgcgcagctgctcgacacccttgaaggcgagaagaaagatcccttcatgctgcac
tacaacttcccgccttactcggtgggcgagtgcggtcgtatgggcgctaccggtcgccgc
gaaatcggtcacggccgcctggctcgtcgttcggttgctgccatgctgccgagcgctgac
gaattcccgtacaccattcgcgtggtttcggaaatcaccgaatccaatggttccagctcc
atggcctcggtctgcggtgcttccctggccctgatggacgccggtgtgccgatgaaagca
ccggtagccggtattgccatgggtctggtcaaggaaggtgacaagtttgccgttctgacc
gacatccttggcgatgaagatcatctcggcgacatggacttcaaggtggccggtaccgcc
aaaggcgttaccgcactgcagatggacatcaaaatccagggcatcaccgaagagatcatg
gagcaggctctggagcaagctctggaagcccgcctgaacattcttggtcagatgaatcag
gtcatcggtcagtcgcgtaccgaattgtcggccaacgctccgaccatgatcgcgatgaag
atcgaccaggataagatccgcgatgtcatcggcaagggtggcgctaccatccgcagcatc
tgcgaggaaaccaaagcctcgatcgacattgaggacgatggctcgatcaagatcttcggt
gaaaccaaggaggctgcagaagccgccaagcagcgcgttcttggcatcactgccgaggcc
gagatcggcaagatctacgtcggtaaggttgagcggatcgttgacttcggcgcgttcgtc
aacatcctgcctggcaaggacggcctggtgcatatctcgatgttgagcgatcagcgtgtc
gagaaagtcaccgacgtgttgaaggaaggtcaggaagtgaaggtactggtactggacgtg
gataaccgcggccgtatcaagctgtccatcaaggacgtggctgcggcggaagcttcgggc
gtctga
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