Phytohabitans suffuscus: Psuf_053680
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Entry
Psuf_053680 CDS
T06545
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psuf_053680 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuu03400
]
Psuf_053680 (xthA)
Enzymes [BR:
psuu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Psuf_053680 (xthA)
DNA repair and recombination proteins [BR:
psuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Psuf_053680 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BCB88055
UniProt:
A0A6F8YPF5
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Position
complement(5769214..5769981)
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AA seq
255 aa
AA seq
DB search
MRLATWNVNSLKMRLPRLVPWLADKQPDVLLLQETKLADAAIPTAEIKEAGYEVATHGDG
RWNGVAILSRIGIEDVVRGFAAEPGFPDPETRAISATCGGLRVWSVYVPNGREPDSPHYA
YKLSWLAALRDALAADLAMGQPVVVAGDFNVAPTDADVWDPKAFAGSTHVTAPEREALAR
ILAAGFTDVVPTPMKGPHPFTYWDYRAGMFHQNMGMRIDLVYASAGVTVRSAYIDREARK
GKGPSDHAPVVVELT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgccacgtggaacgtcaactcgctcaagatgcgcctgccccggctcgtcccg
tggctcgccgacaagcagcccgacgtcctgctcctgcaggagaccaagctcgcggacgcg
gccatccccaccgccgagatcaaagaggccgggtacgaggtcgccacccacggcgacggc
cggtggaacggcgtggcgatcctctccaggatcggcatcgaggacgtcgtccggggcttc
gccgccgagcccggctttcccgatccggagacgcgcgcgatctcggccacctgcggcggg
ctgcgcgtgtggtcggtgtacgtgccgaacggccgcgagcccgactcgccgcactacgcg
tacaagctgagctggctcgccgcccttcgcgacgcgctcgccgccgacctcgccatgggc
cagcccgtggtggtggccggcgacttcaacgtggcacccaccgacgccgacgtgtgggac
ccgaaggcgttcgccggctcgacccacgtcaccgcgccggagcgggaggcgctcgcgcgg
atcctcgcggccggcttcaccgacgtggtgccgaccccgatgaaaggaccgcaccccttc
acgtactgggactaccgcgccggcatgttccaccagaacatgggcatgcggatcgacctg
gtgtacgcgagtgccggcgtgacggtgcggtcggcctacatcgaccgcgaggcgcgcaag
ggcaagggtccgtcggaccacgcgccggtggtcgtcgagctgacctag
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