KEGG   Pseudomonas sp. VLB120: PVLB_01100
Entry
PVLB_01100        CDS       T02897                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psv  Pseudomonas sp. VLB120
Pathway
psv00300  Lysine biosynthesis
psv00470  D-Amino acid metabolism
psv01100  Metabolic pathways
psv01110  Biosynthesis of secondary metabolites
psv01120  Microbial metabolism in diverse environments
psv01230  Biosynthesis of amino acids
Module
psv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PVLB_01100 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PVLB_01100 (dapF)
Enzymes [BR:psv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PVLB_01100 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like DUF3261
Other DBs
NCBI-ProteinID: AGZ33030
UniProt: A0AA86AAD1
LinkDB
Position
complement(262544..263374)
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVQNDGQVCVDM
GPPRFIPAEIPFIAEQQALSYSLEVDGRDYSIAALSMGNPHAVLRVDDVQTAPVHELGPK
IENHPRFPQRVNAGFLQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPV
TLDLPGGRLNIEWAGPGKPVLMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcatgggctgggcaacgacttcatggtcctggacctg
gtcagccagcacgcccacatccagcctaagcacgccaagcaatggggtgaccgccatacc
ggcatcggtttcgaccagttgctgatcgtcgaggcgccgaacaatccggaagtggatttc
cgttaccgcatcttcaacgctgacgggtccgaggttgaacagtgtggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgactgcgaagaagcgcatccgcgtcgaa
accaaaggcgggatcatcgagctggacgtgcagaacgatggccaggtatgcgtcgacatg
ggcccgccacggttcatcccggccgagattcccttcatcgccgagcaacaggcgctgagc
tactcgctggaggtcgacggccgcgattattcgattgccgccctctccatgggtaacccc
catgcggtgctgcgtgtcgatgacgtacaaacggcaccggtgcatgagctggggccgaag
atcgaaaatcatcctcgcttcccacaacgggtcaatgccgggttcctccaggtcatcgac
cgtcatcgtgccaacctgcgagtgtgggagcgcggcgcgggggaaacccaggcctgcggc
accggtgcttgcgctgcggcggtcgctgcaatcagtcaggggtggatggattctccggtc
accctcgacctgcctggtggacgcctgaacatcgaatgggccggccccggcaagcctgtg
ttgatgaccggccccgccgtgcgtgtctacgaaggacaggttcgtctctaa

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