Pseudomonas sp. VLB120: PVLB_13875 Help Entry PVLB_13875        CDS       T02897                                  Name (GenBank) DEAD/DEAH box helicase   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism psv  Pseudomonas sp. VLB120 Pathway psv03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:psv00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     PVLB_13875   09124 Replication and repair    03420 Nucleotide excision repair     PVLB_13875  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:psv03021]     PVLB_13875    03400 DNA repair and recombination proteins [BR:psv03400]     PVLB_13875 Enzymes [BR:psv01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PVLB_13875 Transcription machinery [BR:psv03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      PVLB_13875 DNA repair and recombination proteins [BR:psv03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      PVLB_13875 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD Helicase_C Motif Other DBs NCBI-ProteinID:  AGZ35561 UniProt:  A0AA86ADM2 LinkDB All DBs Position complement(3070294..3072555) Genome browser AA seq 753 aa AA seqDB search MTYSVAVRALCEFSAKVGDLDLRFTPSPTALEGIEGHRRVVARRAADYESEITLEGQYRG LQVRGRADGYDPSCNRLEEIKTYRGDLARQPANHRQLHWAQAKVYAWLLCQARQLASIDV ALVYLDVDNDGQTLISERYQAGQLQTFYETQCQRFLAWAQYQEQRLAERNQGLQVLGFPY PQFRQGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAMAPQQLDKLFFLTAK TPGRALALDALRQIDDASAQPALRTLELIARDKACEHPDKACHGESCPLAQGFYDRLPAA RESAARLPMLDRQLLREVALAHQVCPYYLGQEMARWVDVVVADYNYYFDAHALLFSLTQA NQWRVAVLVDEAHNLIERGRGMYSASLDQGQLLALRQSKPVGLGSALDRLNRQWNAVFKA QQAPYQASDKLPEAFLRALQGCIGVIQERLDQSNGEVDPQVLQFFFQALQFNRVAELFDE HFLFDISLRSGQRNRRLATLCLRNVTPARLLGPRMQAARSVTLFSATLSPRHFYADLLGM PSDTAWLEVAAPFRGEQLQVRIASEVSTRYHQRHASLEPIATLIAEQYQRMPGNYLAFFS SFEYLQQVADVLARRHPTIPLWLQSPGMDEQARQAFLDRFVADGQGVGFAVLGGAFGEGV DLPGTRLVGAFVATLGLPQVNPVNEQFKLRLGRQFGAGFDYAYLYPGVRKVIQAAGRVIR GDQDRGVLVLIDERFAQARVQQMFPGWWHMAGE NT seq 2262 nt NT seq  +upstreamnt  +downstreamnt gtgacctactcggtagcagtacgtgcgctttgtgagttcagtgccaaggtcggtgacctg gacctgcgcttcacgccatcgcccacggcgctggaaggcatcgaagggcatcggcgagtg gtggcccggcgcgcggccgactatgagtcggaaatcacccttgaaggccagtatcggggt ttgcaggtgcgcgggcgtgccgatggctacgaccccagttgcaatcggctggaggagatc aagacctaccgtggcgatctggcgcgccagccggccaaccatcggcaactgcactgggcg caggcgaaggtatatgcctggctgctgtgtcaggcccggcagctggcgtcaatcgacgtc gcgctggtgtatctggacgtcgacaacgatggccagacgctgatcagcgagcgctaccag gctggacaattgcaaaccttctacgaaacccagtgccagcgatttctcgcctgggcccaa tatcaggagcagcgcctggccgagcgcaaccagggtttgcaggtattgggctttccatac ccgcagtttcgccagggccagcgccagttggccgagaccctgtacaaggcggtcagcact ggccgttgcctgatggcccaggccagcacggggatcggcaagaccctgggtacgctgttc ccgttgctcaaggccatggcgccgcaacagctcgataaactgttcttcctgacggccaag accccaggccgggcactggccctcgacgccctgcgacagatcgacgatgcctcggcgcag ccggcgttgaggaccctggagttgatcgctcgcgacaaagcctgtgagcaccccgacaaa gcgtgccatggcgagtcctgtcccttggcccagggcttttacgatcgcctgccggcggcg cgagagtcagcagcacgcctgccgatgctcgatcggcaactgcttcgcgaggtggctttg gcccaccaggtgtgtccgtactacctgggccaggaaatggcccgttgggtggatgtggtg gtggccgactacaactactacttcgatgcccatgcgttgctgttcagcctgacccaggcc aaccagtggcgggtcgcggtgctggtggacgaagcccacaacctgatcgagcgcggccgc ggcatgtacagcgccagtctcgaccagggccagttgcttgcgctgcgccagagtaaacca gtgggccttggcagcgcgctggaccgtctgaaccggcagtggaatgccgtgttcaaggcc caacaggcgccgtatcaggccagcgacaaactaccggaggcttttctgcgagccctgcag ggatgcatcggggtcatccaggaacgcctggaccagtccaatggtgaagtggacccgcag gtgctgcagttcttcttccaggccttgcagttcaatcgggtggccgagctgttcgatgag cacttcctgttcgatatcagcttgcgcagcggtcagcgcaatcggcgtctggccaccctg tgcctgcgcaatgtcacgccggcgcggctgctgggcccgcgcatgcaggctgcccggagc gtgacgctgttctcggccacgctcagccccaggcatttctatgccgacctcctgggcatg ccctcggataccgcatggcttgaggtggcggcgccatttcggggtgaacagctgcaagtg cgtatcgccagcgaagtgtccacccgttaccaccaacggcacgcctcgctggagcctatt gccaccctgatcgccgagcagtatcagcggatgccgggcaactatctggcgtttttcagc agcttcgaatacctgcaacaggtcgccgacgtgctcgcccgtcgccacccgacgatccca ttgtggctgcagtcgccgggcatggacgaacaggcgcgtcaggcgtttctcgaccgcttt gtcgccgacggccagggggttggcttcgcggtccttggtggcgccttcggtgaaggggtc gacttgccgggtacgcgcctggtcggcgcctttgtcgcgaccctcggtctgccgcaagtc aacccggtcaacgaacagttcaagttgcgactgggtcgccagttcggcgccggattcgac tacgcctatctgtacccaggtgtgcgcaaggtcattcaggccgctggtcgggtcatacga ggcgatcaggaccgtggcgtgctggtgctgatcgacgagcgctttgcccaggcgcgggtc cagcagatgtttccgggatggtggcacatggctggcgaataa

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