Pseudomonas sp. VLB120: PVLB_27547
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Entry
PVLB_27547 CDS
T02897
Symbol
rdgC1
Name
(GenBank) recombination associated protein
KO
K03554
recombination associated protein RdgC
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_27547 (rdgC1)
DNA repair and recombination proteins [BR:
psv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PVLB_27547 (rdgC1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
AGZ38246
UniProt:
A0AAN0R897
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All DBs
Position
pSTY:complement(267712..268608)
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AA seq
298 aa
AA seq
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MFSNLHLYRITEPWSLSTAELAKRLEKRAFTPCTGSVIKTQGWVEPRVGGGLVFEVQKQI
LLNLCFEEKKVPEPVLQRHVAKKAAKMLSEKGYKPSRDQLKAMKEEAFIELLPRAFESQS
TEKVWIDTSAGLIGIDCGSPAKADDVVTQIHDAIDIPASLIRTSMDPSSAMATWLMNNES
PDEFTVDREVNLQGLDLEKSKVGYASISLEREEIRQHLLEGRRPVRLAMTFNEEVSFVLT
DKSTLKRIVFLENVNKEIPDEEEEEAAFGAMFLTYAGVLAKLVPALMEALGGEEAAQG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgaaccttcacctctaccggattactgagccctggagcttgtctacggccgag
cttgcgaaacgtctggaaaaaagggcattcactccctgtacgggtagcgtcatcaaaacc
cagggttgggtggagccccgggttggcggtggcctcgtgttcgaggtgcagaagcagatc
ctgctaaatctgtgctttgaagaaaagaaggtacccgagcctgtattgcagcgacacgtg
gcgaagaaggcggccaagatgctctccgagaagggctacaagccgagccgggaccagctc
aaggcgatgaaggaagaggcgtttatcgagctcttgcccagggcattcgagtcacagagc
actgagaaggtgtggatcgatacttcggcgggcctgatcggcatcgactgtggctcaccg
gcgaaagccgatgatgtcgtcactcaaatacatgacgccatcgatatccctgcatcactg
attcgaacctcgatggacccctcctctgcgatggccacctggttgatgaacaacgaatcc
cccgacgaattcacggtcgaccgtgaggtcaacctgcaggggctggaccttgaaaaatct
aaggtgggctacgcctcgatcagcctggagcgcgaggagatccgacagcacctcctcgaa
ggtcggcgccccgtacggttggccatgacgttcaatgaagaggtgtccttcgtgctgact
gacaagtcgacactcaagcgcattgttttcctcgaaaacgtgaacaaagagattcccgat
gaggaggaagaggaggctgcattcggcgcgatgtttctgacttacgccggcgtgctggca
aagctcgtacccgctctcatggaagcgctcggcggtgaggaggccgcacagggataa
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