Pseudoliparis swirei (Mariana hadal snailfish): 130188457
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Entry
130188457 CDS
T09868
Symbol
cacna1aa
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130188457 (cacna1aa)
04020 Calcium signaling pathway
130188457 (cacna1aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130188457 (cacna1aa)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130188457 (cacna1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
130188457
NCBI-ProteinID:
XP_056262804
LinkDB
All DBs
Position
23:complement(8261189..8335437)
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AA seq
2511 aa
AA seq
DB search
MARFGDEVPARYGGGPGGGGPGGRGGSRQGGPHGHGHGHGHGHGHGHGPPGGPGTQRVYK
QSMAQRARTMALYNPIPVRQNCFTVNRSLFIFSEDNFIRKYAKKITEWPPFEWMILSTII
ANCIVLALEQHLPDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFHKNSYLRNGW
NVMDFVVVLTGILSTIGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQI
GLLLFFAILMFAIIGLEFYMGKFHTTCFDNHTGEIREEFPCGTEPPSRLCPEGTMCRQYW
LGPNYGITQFDNILFAILTVFQCITMEGWTDLLYYSNDVSGSAWNWMYFIPLIIIGSFFM
LNLVLGVLSGEFAKERERVENRSEFMKLRRQQQIERELNGYLEWICKAEEVILADDDNEN
DYDGSRRRATKNHKSKAELLNPEEGEGDLAVGSPFARGSLKSSKLEGSDFKRRERRLRFL
VRHIVKSQAFYWTVLCLVGLNTMCVAVVHYDQPDPLSDFLYFAELVFLGIFLTEMMVKMY
GLGKQAYLNSSFNCFDCIVICGSIFEVLWSIIQPGTSFGISVLRALRLLRIFKVTKYWAS
LRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFESGTPPTNFDTFPAAIM
TVFQILTGEDWNMVMYDGIKSQGGVNKGMAFSVFFIVLTLFGNYTLLNVFLAIAVDNLAN
AQELTKDEQEEEEAASKKIALQKAKEVAEVSPLSAANLSIAANKVHSECHNASDPFLDCK
EQQKNNKGINKSVWEQRTKELRRQTLVTSREALYNELDTDERWKARTGREEQNNVNCSRN
VRPDMKTHLDRPLVVDPLENRNNNTNKTTANNSELCFSQQQPADELNRQTRLHEHSGQVG
GGGGGGSAPVRPPLDRGESTESRRSRKGEHHHRSSHVRLDATVIPGPGSEERPSRRHHHA
RSGSRGGGQSEHRKPRTHRKCAEDGEDGAGGAVKTGRHKNKGVDGGGEGGEREGAGDGSE
RRPRRNRHGNQTEGEGRRMCQHRRKDCGVPNLSTTRPIQKSVSRQDSQYSEDMDNLMNTK
LVSGSTPASDGQPNPVPNHIVAPGFGSALQLANSGTHGSLVTLDSYGSIAHHRTNSVLRL
PHPDYTALDVPIFPSTNAILQINKNANTEPLPPKEDKDDDDDEKGGEGGRKPMPPFSSMF
ILSTTNPFRRLCHYICTLRYFEMCILLVITMSSIALAAEDPVWPESPRNNVLRYFDYVFT
GVFTFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGGGGSSKGKDISTI
KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYLLFMFIFAVVAVQLFKGR
FFYCTDESKEFERDCRGEYLVYEYNNEVKAQKREWKKYDFHYDNVAWALLTLFTVSTGEG
WPQVLKHSVDATYENRGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKM
MEDYSLEKNERACIDFAINTRPLTRHMPQNKLSFQYRMWEFVVSPPFEYTIMAMIALNTV
VLMMKYDGASETYEAVLANLNIVFTSLFSMECVLKIIAFGVLNYFKDAWNIFDCVTVLGS
VTDILVTELGMNNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIA
MLFFIYAIIGMQLFGSIAIEEDGESAINQHNNFQTFVMALMLLFRSATGEAWHEIMLSCL
GSKRCDPQTGNPEPECGSQFAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGP
HHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVA
DDNSVHFNSTLMALIRTALDVKIAKGAEGGIDKHQMDAELRKEMMAIWPNLSQKTLDLLV
TPHKSATDLTVGKIYAAMMIMEYYRQSKIKRSQALRDEQNRTPLLFQRVEPPSPGQDGGP
GLNNALPPPETTETVNGLPVEGGVPESQSWVTARAQEMSQKAGSWSPEGRPEDGLGSMSN
SQTVEMREMGQDGYSDTENFPPMEGHGRAASMPRLPGDNQTINDSSPMKRSASSLGHSRS
GRGHRDKGGADDYNMESVPEEGRTSRHGHRRKDRNHRASERSLCRYAEADTGVGTDLSTT
TQSGDLTSKDKDRDRDRGRSKDRKHHHHHHHHHGSVDKERYVAERGGEYGHRHTRDREHD
REREQDRDREREPDRRWSRSPSEGRECMTHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQ
TPATPRPHVTYSPVVRKAAPTQPGGPQSRPPAPRHFSPEPAQGQGPPPAGPPIAHHGTSR
QGHHPPPRWGDTGGGSGSMEEDGCFYSQDYEPHHEPPAYEQSPMQGANHPLPPPPQPQPH
NPHPLPPPQPHPVNNPHPHPPPHPQPSRISPRTAGQAPPPTTALTGPAQGQMQPAAQRRL
PNGYRSSSPSTHLHGPPHTGPHKVPPPAGHPRGPCKGPHEPYSEKEANDWC
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atggcacggtttggagatgaggtaccggccaggtatggcggtgggcccggcggagggggc
ccgggcggccgaggtgggagcagacaaggaggaccccacggacacggtcacggacacggg
catggacacggccatggacatggcccacccggagggcccggtacccagagagtgtacaag
cagtctatggcgcaaagagcccggaccatggccctgtataaccccattcccgtgcgccag
aactgtttcaccgtcaaccgctcgctgttcattttcagtgaggataacttcatcagaaaa
tacgccaaaaagatcaccgaatggcctccatttgagtggatgattctttccaccatcatc
gccaactgcatcgtcttggctctggagcaacatttgcctgatggggacaagacgccgctg
tctgagcgcctggatgatacggagccgtacttcatagggatcttctgttttgagtctgga
ataaagatcctggcgctcggtttcgcgttccacaagaactcctacctgaggaacggatgg
aacgtcatggactttgtggtggtgctcacggggatcctgtccactataggttccgatttc
gacttgcggaccctcagggcggtgcgagtattgaggcccctcaaactggtgtccggtatt
cccagcttacaggtggtgctcaaatccatcatgaaggccatgattcctctgctgcaaatt
ggcctgcttcttttctttgccatcctcatgttcgccatcatcggcctggagttctacatg
ggcaaattccacacaacctgctttgacaatcacacaggtgagatccgggaagagtttcca
tgtgggacggagcctccgtcccggctgtgtcccgagggcaccatgtgtaggcagtactgg
ctgggaccaaactacggcatcacacagtttgacaacatcctgtttgctatcctcaccgtc
ttccagtgtatcaccatggagggctggacggacctgctctactatagcaacgatgtctca
gggagtgcatggaactggatgtacttcattcccctcatcatcatcggctccttcttcatg
ctcaacctggtgctgggtgtattgtcaggggagtttgccaaagagagagagcgtgtggag
aacagaagtgagttcatgaagctcagaagacagcagcagattgaaagggaactcaatggt
tatttggagtggatctgcaaagctgaagaggtcatcttggcggatgatgacaatgaaaat
gattatgacggctcacggagaagagccacaaagaaccataagagcaaagcagagctttta
aacccagaggaaggggagggagatctggcagtcgggtcaccgtttgcccgcggcagcttg
aagagctccaagctcgaaggatcggatttcaagcggcgggagcgccggctccgcttcctt
gtccgacacattgttaagtcccaggccttctactggaccgtgctgtgtttggtgggcctg
aataccatgtgtgtggctgtagtgcactatgaccagccagacccactgtcagattttcta
tattttgctgaattagtcttcctggggatattcttgacagagatgatggtgaagatgtac
ggcctgggcaagcaggcctacctcaactcctccttcaactgcttcgactgcattgtgata
tgcggtagtatttttgaagtgctgtggtccatcatccagccgggcacttccttcggcatc
agtgtgctacgagctctcaggttattgaggattttcaaagtcaccaagtactgggcatct
ttgcgtaaccttgtcgtctctctgctcaactccatgaagtccatcatcagcttgctcttc
ctgctcttcctcttcatcgttgtcttcgccctgctgggcatgcagctcttcggaggacag
tttaattttgaaagtggcactcctccaaccaacttcgataccttccccgcagcaataatg
acagtgttccagattctgactggcgaggactggaacatggtgatgtacgatggcatcaag
tctcaaggcggagtcaacaagggcatggccttcagtgtcttcttcattgtcctcacactt
tttggcaactacactctgctgaatgtgttcttggccatcgccgtggataatttagccaac
gcacaggaactgaccaaggatgaacaggaggaagaggaggctgccagtaagaagatcgcc
ctgcagaaagccaaggaggtggctgaagtcagccccttgtctgccgccaacctttccatt
gcagccaacaaagtacacagtgagtgtcacaacgcttccgacccctttctggactgtaag
gagcagcagaagaacaacaagggcatcaacaagtcagtgtgggaacaacgcaccaaggag
ctgaggaggcagacgctggtgaccagccgcgaggcgctctacaatgagctggacaccgat
gaacgctggaaggcaaggacagggagggaggagcaaaacaatgtgaactgctcccgtaac
gtccgtccagacatgaagacccacctcgaccggccgttggtggttgaccccctcgagaac
cgcaacaacaacaccaacaagaccaccgcaaacaattcagagctctgcttcagccagcag
cagcctgctgacgagctgaacagacagacacgcctccacgaacacagcggccaagtcgga
ggtggtggcggaggaggctcggctccggtcaggcctcccttggatcggggcgaatccaca
gagagccgacggagtcgtaaaggcgagcaccaccaccgcagctctcacgtccgattggac
gccacggtgattcctgggccaggctcggaggagaggccttccaggcggcatcaccacgcc
cgcagcggcagtcgagggggcgggcagtcagagcacaggaagcccagaacgcatcggaaa
tgtgccgaagatggcgaggatggcgcgggaggagccgtaaaaacggggagacacaagaac
aaaggagttgacggaggtggagaaggaggagagcgggagggagctggggatggcagtgag
aggaggccaagaagaaatcgccatggcaaccaaactgagggcgaggggaggaggatgtgc
cagcacagaaggaaggattgcggtgtcccgaacctctctacgacacggcccattcagaag
agcgtctccaggcaggacagccagtacagtgaggacatggacaacctcatgaataccaag
ctggtctctggctcgaccccggccagcgatggtcaacctaatccagttcccaaccacatt
gtggccccaggctttggatctgccctccaacttgctaacagtggcactcatgggagtttg
gtcacattagatagctacgggagcatcgcccatcaccgtaccaacagtgtcctcaggctg
ccccaccctgactacacagcattagacgtgcccatttttccatccactaatgccatactg
cagatcaataagaatgccaacacagagcccttgccaccaaaggaggataaggacgacgat
gatgatgagaagggcggtgaaggcggacgcaagcccatgcctcccttcagctccatgttc
atcctgtccaccaccaacccgtttcggcggttgtgtcactacatctgcaccctgcgatat
tttgagatgtgcatcctgctggtcattaccatgagcagtattgccctggcagctgaagac
cctgtgtggcccgaatcccctcgcaataatgttctacgttatttcgactatgtcttcaca
ggagttttcacatttgagatgctaataaagatggtggatctggggctcgtcttgcaccag
ggctcatattttcgggacttgtggaacatccttgactttatagtggttagtggtgctctg
gtggccttcgccttcaccggcggcgggggcagcagtaagggaaaagacatcagcacgatc
aagtctctgagggtactgagagtgttgcgacctctgaagaccatcaaacgtcttcctaaa
ctcaaggctgtgtttgactgtgtggtgaactctctgaagaatgtgctgaacatcctgatc
gtctacttactcttcatgttcatctttgctgtggtggccgtgcagctcttcaaggggcgc
ttcttttactgcactgatgaatccaaagaatttgagcgcgactgcaggggcgagtatctg
gtgtatgaatacaataacgaagtgaaggcgcagaagcgggagtggaagaagtacgatttc
cactacgacaacgtggcttgggccctcctcaccctcttcaccgtttctaccggagagggg
tggccgcaggtactgaagcattcagtggatgcgacctatgagaatcggggcccgagcccg
gggtaccggatggaaatgtccatcttttacgtggtgtacttcgtggtcttccccttcttc
ttcgtcaacatcttcgtggctctcatcatcatcacgttccaagagcaaggagacaagatg
atggaggactatagtttagaaaagaatgagagagcctgtatagactttgccatcaacacc
aggcccctgacacgccacatgcctcagaacaagctgagctttcaataccgcatgtgggag
tttgtggtttcgccgccatttgagtataccatcatggcgatgatcgcgctcaacacggtc
gtgctgatgatgaagtatgacggcgcttctgagacctatgaagctgtgctagccaacctg
aacatagtgtttacctccctcttctccatggagtgtgtactgaagatcatcgcctttgga
gtactgaattatttcaaagatgcctggaatatttttgactgtgtgacagttctgggcagc
gttactgacatcctggtcaccgagcttgggatgaataatttcatcaacctaagtttcctg
aggctgttcagggcagctcgtctcatcaagctgctgcgccagggagaaaccatccgtatc
ttgctgtggaccttcgttcagtccttcaaggcactgccttatgtctgcctcctcattgcc
atgctgttcttcatttacgccattattggcatgcagctgtttggaagtatcgcaattgaa
gaagacggagagagtgccatcaatcagcacaacaacttccagaccttcgtaatggctctc
atgctgctcttcagaagtgcaaccggagaggcgtggcacgagataatgctttcgtgtctg
gggagcaagaggtgtgaccctcagacaggaaatccggagccggagtgtggcagccagttt
gcatacctctactttgtctccttcatcttcttctgttcattcttgatgctgaatctgttc
gtggccgtcatcatggataactttgagtatctgacgagagattcatccatcctgggacct
caccacctggatgagtatgtcaggatatgggccgagtatgatcctgctgcctgcgggcgc
attcattataaggacatgtacagtttattacgagtaatcgacccgcctctcggcttaggc
aagaaatgcccccatagggtggcctgcaagcgactgctccgtatggatctgcccgtggcc
gatgacaactcggtccacttcaactccaccctcatggccttgatccgcacagcactggac
gtcaagatcgccaagggtgcggaaggtggtattgacaagcaccagatggacgcagagctg
aggaaagagatgatggcgatctggcccaacctctcccagaagactctggatttgctggtt
acgccacataagtcagccacagacctgacagtggggaaaatctacgcagctatgatgatc
atggagtactaccggcagagcaagatcaagcgctcgcaggctcttcgtgacgagcagaat
cgaacgccattactgtttcagcgcgtggagcctccttcccccggccaggatgggggtccg
ggacttaacaacgccctccctccacctgagacgacagagactgtcaacggcctgccggtg
gaggggggggtcccggagagccaatcgtgggttacggctcgtgctcaggagatgtcccag
aaggccggcagctggagccccgagggacgccctgaggacggcctgggaagcatgagcaac
tctcagacggtagagatgagagagatggggcaggatggttactcggatactgagaacttt
ccaccaatggaaggccatggcagggccgcttccatgccccgcctcccaggcgacaaccaa
accatcaatgacagcagtcccatgaagcgctccgcctcgtcgctgggccacagcaggtct
gggcggggccacagagacaaaggaggtgcagacgactacaacatggagagtgtacccgag
gaggggagaacttccagacatggacaccggcggaaagaccggaatcatcgtgcatctgag
aggtccctgtgccgctacgcagaggctgacacaggcgtcggcacagacctgagcacaacc
acccagtcgggcgacctcacgtccaaagacaaggatcgcgacagagatcgcggccggtcc
aaagaccgcaagcaccaccaccaccatcaccaccaccacggctcggtggacaaggagcgc
tatgtagcagagcgagggggcgagtacgggcacaggcacacccgcgaccgggagcacgac
cgggagcgagagcaagaccgggatagggagagagaaccggaccggcgctggtcccgatcg
cccagcgagggtcgcgagtgcatgacgcacagacagggcagtagttcggtcagtggaagt
cccgtcccctcaacctcggggaccagtacgccacgccgggggcgccgacagttgcctcag
acccctgcaacaccccggccgcatgttacctactcccctgttgtccgtaaggccgcgccc
acacaacctgggggaccacagagccgaccaccagccccccgccacttttctccggagcct
gcccaaggacagggtcctcctcccgctggaccccctatagcccaccatggcacatctcgc
cagggtcatcatcccccgcctcgctggggagacacaggtgggggaagtggctccatggaa
gaggatggctgcttctacagccaggactatgaaccccatcatgaaccacctgcttatgag
cagagccccatgcaaggtgccaaccacccactgccacctcctccacagccacagccacac
aacccccatcccctccctccaccccagccacaccctgtaaacaacccccaccctcatcca
ccgccccacccacagcccagtcgcatctcgcctagaactgccggccaggcgccccctccc
accaccgccctgactgggcctgcacagggccagatgcagcctgccgcccagcgccgctta
cccaatggctaccgctcttcttcgccatccacacatctccatggacccccacatactggg
cctcacaaggtcccgcctccagctgggcatcccagaggtccctgcaagggcccgcatgaa
ccctacagcgagaaggaggcgaacgactggtgctag
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integrated database retrieval system
